Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3381 ATGTCTGACCTCGTCGAGCCTACCGCTGATGTTTGTTTTTATTCTGTGCTTGGAATATGCAAACAGGCTACCGACCACCAAATCCGAAGCGCTTATCGTAAGATGGCTCTGAAATGGCATCCGGATAGGTGGACCAAAGATCCAAAGGCTGCCATAGAAGCTGAAAGGCAGTTTCAACAGATTCAAGAGGCTTATTCAGTTTTGTCCAGTAAAGGGAAGAGAACCATATATGATGCCGGCTTGTTTGGTCTGATCGGAGAGGACGATGATGAAGGATTTGTTGATTTCATGCAAGAAATGATCTTGTTGATGCAGAGAGAGAGCCCCAAGGATGAGAAAAGCACGTTCCAGGATCTTGAGAGACTGCTAATGGACATGATGGCAGACGGTGAAGGGGAAGGCAAATCTGGGTTTCGCTGGAACTTATCAACTAGTCCTAGAAAAAAGATTCGAATCTAA 459 0.451 MSDLVEPTADVCFYSVLGICKQATDHQIRSAYRKMALKWHPDRWTKDPKAAIEAERQFQQIQEAYSVLSSKGKRTIYDAGLFGLIGEDDDEGFVDFMQEMILLMQRESPKDEKSTFQDLERLLMDMMADGEGEGKSGFRWNLSTSPRKKIRI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3381 152 Pfam DnaJ domain 13 78 IPR001623 -
Glsi02g3381 152 PRINTS DnaJ domain signature 14 32 IPR001623 -
Glsi02g3381 152 PRINTS DnaJ domain signature 32 47 IPR001623 -
Glsi02g3381 152 PRINTS DnaJ domain signature 53 73 IPR001623 -
Glsi02g3381 152 Gene3D DnaJ domain 5 91 IPR036869 -
Glsi02g3381 152 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Glsi02g3381 152 CDD DnaJ 12 69 IPR001623 -
Glsi02g3381 152 SMART dnaj_3 11 73 IPR001623 -
Glsi02g3381 152 PANTHER PUTATIVE, EXPRESSED-RELATED 8 132 - -
Glsi02g3381 152 SUPERFAMILY Chaperone J-domain 10 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3381 Glsi-ChrGlsi02 81363240 81364158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3381 12 79 C2H2 Transcription Factor Family AT1G74250 44.928 7.39e-13 63.2