Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3372 ATGTGTGGCGGTGCTATCATCGCTGAGTTCATCCATCGCCATCGCGGCCGCCGCCTTACCGCCTCCGAGCTGTGGCCTAATTCACTAGGCAAGCGGAATGAGTTGGAGTTCGAATTCGATTATTCTCAACTGGGCCAAGACCAGGATCACTCTGTTCCCCTTAAATCACTCCATCCTTCCCCAGTTCATGAGCAAGCTGAGAAGCCCGTGAAGAGGCAGAGGAAGAACCTTTACCGAGGGATTCGGCAGCGTCCATGGGGTAAGTGGGCCGCCGAGATTCGCGATCCCAGAAAAGGGGTTCGTGTTTGGCTTGGTACCTTCAACACCGCCGAAGAAGCAGCCAGGGCCTATGACAGAGAAGCAAGGAAAATCCGCGGCAAGAAAGCCAAAGTGAATTTCCCCAACGAAGACGATGATTACTCCATTCAATCTCGTCGTAACCCATCTCCTCCTGTTCGACGCACAATTCCTCCAGTGTATCCACCACAGTACGGTTCAAATTTTAAAAATCTCCCAAAAAGTTTGAATTTGGAATTTGGTTATGATCTGAACCAAGTTGGGAGAATTCGTTCCCATGTATTCGATACCATTGGTGCTATTGACACTGACCCAATTGTTGGTTATGGGCATGAAAATTCTGGAAGTGGGTCAGGATCAGGATCAGAGGGAGCTTACTCGACAACGGAGTTTATGGGCTCGAATCAGAACGTGGACAGTTATTTTCCTCAGGGGAATGTGGACGAGAAAGAGGCAGAGGCGGAAGGAAACATGAATAAGGTGGTGATGGAAGCTAAGGAGGAGGAGAACGAAATACAGAAGCTGTCGGAGGAGCTGATGGCGTACGAGAATTACATGAAATTTTATCAGATTCCATACTATGATGGGCAGTCGACAGCACCGAATAACGTTCCGGAAAGTGTGGTGGGTGATCTGTGGAGCTTCGATGATGAGGGCATTCCTGCTTCTGTGACCTCATCAGCCGTGCGTCCCATTTCTCAGTACTGA 1005 0.4945 MCGGAIIAEFIHRHRGRRLTASELWPNSLGKRNELEFEFDYSQLGQDQDHSVPLKSLHPSPVHEQAEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDDYSIQSRRNPSPPVRRTIPPVYPPQYGSNFKNLPKSLNLEFGYDLNQVGRIRSHVFDTIGAIDTDPIVGYGHENSGSGSGSGSEGAYSTTEFMGSNQNVDSYFPQGNVDEKEAEAEGNMNKVVMEAKEEENEIQKLSEELMAYENYMKFYQIPYYDGQSTAPNNVPESVVGDLWSFDDEGIPASVTSSAVRPISQY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3372 334 PANTHER DNA-BINDING DOMAIN 60 247 IPR044808 GO:0003700|GO:0009873
Glsi02g3372 334 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Glsi02g3372 334 SUPERFAMILY DNA-binding domain 77 135 IPR016177 GO:0003677
Glsi02g3372 334 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Glsi02g3372 334 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Glsi02g3372 334 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Glsi02g3372 334 MobiDBLite consensus disorder prediction 49 72 - -
Glsi02g3372 334 Coils Coil 250 284 - -
Glsi02g3372 334 CDD AP2 78 135 IPR001471 GO:0003700|GO:0006355
Glsi02g3372 334 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Glsi02g3372 334 FunFam Ethylene-responsive transcription factor 2 76 135 - -
Glsi02g3372 334 MobiDBLite consensus disorder prediction 132 161 - -
Glsi02g3372 334 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3372 Glsi-ChrGlsi02 81334069 81335188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3372 1 185 AP2-EREBP Transcription Factor Family AT3G16770 44.550 4.21e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g3372 AP2 1e-12 CL0081