Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3365 ATGGCTTGGAAGGTCTTCTTCAAAGCTACATTCACATTTTTCTTTCTCCTTCCCCGCTTTGCATTCCTTGCTATTGCAGATGATTTCGCAACCAACCCTGTTCCGCAAGAAACCATATGCGAGTCCACCCCTAACCCATCTTACTGCAGAGCCGTGCTTCCCAAGCAAAATGGTAAAGTGCACGACTTTTGCAAGTTCTCGCTTCAAAAATCCTTATTACAGTCGCGCAAACTTTTGAAGTTAGTGAACTTTTACCTTGGTAGCCAGTTCACGTTGTCCCAAGGGACTATTCGTGCACTCCAAGATTGCAAAATTCTCTCCGAGCTTAACGTGGAATTCTTATCCAAGTCCACTGATGTTGTCATGAAGAGCAGTGAAACTCTTTCCAGCTCGGAAGTTGATGATGCCCATACCTTGCTCAGTGCCATTTTAACGAACCACCAGACTTGTTTGGGTGGACTAATGGATACGACTTCCGATTTGAGCATAAAGAATGGCTTTTTTGGCCAACTCTCTGATGACAGTAAGCTCCACGGTCTCTCTCTGGCTCTGTTCGCAAAGGGGTGGGTACACGAGAATAAGAACAAGACAATATGGGATTCCACAGGCTGGCATCCGGGTTTTCGAAATGGTCGATTACCTCTGAAGATGTCAAACCGAACGAGGGCCATTTACGATTCAGTTAGAGGCAGAAGAAAGCTTCTGGATGATGATGAAGAAGCAGAAAGTGTTCTAATTAGTGACATTGTGGTTGTCAATCCGGATGGAAGTGGAAACTTCACCACCATCAACGACGCTGTCGCTGCAGCCCCAATTAACGGTAATGATACCAATGGCTATTTCATGATTTATATCACAGAGGGTGTGTACGAAGAATACCTGTCCATCCCCATAAACAAGCCGTATCTGATGATGATCGGAGATGGGATCAATCGCACAATTATCACCGGCAACCACAGCGTTGGTGACGGATGGACAACATTCAATTCTCCAACATTTGCTATTGTAGCAACAGGTTTTGTAGCAGTCAACATAACGTTTCGTAACACTGCTGGGCCAAGCAAGTTTCAAGCAGTGGCAATGAGAAGTGGAGCGGACCTGTCCACATTCTATAGCTGCAGCTTTGAGGGGTACCAAGACACACTGTATACGCATTCTCTGAGGCAGTTTTACAGAGAATGTGACATTTACGGCACAATAGATTTCATACTTGGAAACGCTGCGGTTGTTCTGCAGAACTGCAACATTTATCCTCGCCTTCCATTACCGGGACAGTTCAACCCCATCACTGCTCAGGGACGAACAGACCCCAATCAGAACACCGGCACTTGCATTCAAAATTGTACTATTAAAGCCGCAGATGATTTGGCTGGCAGCGTTGGTACTGTGAAAACGTACCTTGGGAGGCCATGGAAGGAGTATTCGAGAACAGTTGTTATGCAGTCGTTCTTGAATAATCTGATTGAGCCGGCCGGGTGGTCTGAATGGAGTGGGGATTTTGCACTGAGCACCTTGTATTACGCAGAGTATGATAACAGAGGACCCGGAGCAAACACTACTGGCAGAGTGACATGGCCTGGTTACCATGTGATTAATGCTACGGATGCAGCTAATTTCACGGTGGCTAACTTTGTGCAGGGAAATGATTGGTTGCCTCAAATAGGGGTTCCGTACATTCATGGACTCATTGTGTTTAACAAGAAGGGGAAACAGATTGACACCGGAAACTAA 1731 0.4593 MAWKVFFKATFTFFFLLPRFAFLAIADDFATNPVPQETICESTPNPSYCRAVLPKQNGKVHDFCKFSLQKSLLQSRKLLKLVNFYLGSQFTLSQGTIRALQDCKILSELNVEFLSKSTDVVMKSSETLSSSEVDDAHTLLSAILTNHQTCLGGLMDTTSDLSIKNGFFGQLSDDSKLHGLSLALFAKGWVHENKNKTIWDSTGWHPGFRNGRLPLKMSNRTRAIYDSVRGRRKLLDDDEEAESVLISDIVVVNPDGSGNFTTINDAVAAAPINGNDTNGYFMIYITEGVYEEYLSIPINKPYLMMIGDGINRTIITGNHSVGDGWTTFNSPTFAIVATGFVAVNITFRNTAGPSKFQAVAMRSGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTIDFILGNAAVVLQNCNIYPRLPLPGQFNPITAQGRTDPNQNTGTCIQNCTIKAADDLAGSVGTVKTYLGRPWKEYSRTVVMQSFLNNLIEPAGWSEWSGDFALSTLYYAEYDNRGPGANTTGRVTWPGYHVINATDAANFTVANFVQGNDWLPQIGVPYIHGLIVFNKKGKQIDTGN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3365 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 187 IPR035513 -
Glsi02g3365 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
Glsi02g3365 576 Pfam Plant invertase/pectin methylesterase inhibitor 37 160 IPR006501 GO:0004857
Glsi02g3365 576 SUPERFAMILY Pectin lyase-like 246 561 IPR011050 -
Glsi02g3365 576 SMART PMEI_2 30 184 IPR006501 GO:0004857
Glsi02g3365 576 CDD PMEI-like_3 38 189 - -
Glsi02g3365 576 Gene3D - 244 562 IPR012334 -
Glsi02g3365 576 FunFam Pectinesterase 244 562 - -
Glsi02g3365 576 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Glsi02g3365 576 FunFam Pectinesterase 37 187 - -
Glsi02g3365 576 PANTHER PECTINESTERASE 26 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3365 Glsi-ChrGlsi02 81291324 81293145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3365 38 563 Carbohydrate Esterase AT4G02330 60.958 0.0 665