Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3364 ATGGCTTTCAAGCTCTTCTCCCTTCTTGCCCTCTGGCTTTCCCTTTTTGTATCGTTATCTATAGCACAGAAGCATGCAAGCCCTAAAGCTCCTCCAGAAACCATTTGCGACTCCACTGTTCACCCTTCTTATTGCAAAAAAATGCTTGCTAACCAGCACGGCAACATCTATGACTATGGGCGCATATCTGTTCGAAAATCCCTATCTCAGTCCCGTAAGTTTTTGAACTTAGTGGACTCACATCTTCAAGGTCAATCCCCTCTGTCTCAATCCACAGTTCGGGCTCTTGAAGATTGTCAATTCCTCGCTCAACTAAACTTCGAATACTTATCAAACACCTACACCACTGTTGATCAATCGAGTGATGTTCTTCCCTCCTCTGAAGCCGAGGATGTTCAAACCTCGCTAAGTGCCATTCTGACAAACCAACAGACTTGTTTGGATGGCCTTGAGACCACAGCTTCTGATTCAAGAGTGAAGAATGATCTTTCCGTTCCTCTCTCTGATGACACTGAGCTTCACAGTGTCTCTCTGGCTCTGTTCATGAAGGGTTGGGTGCCTCAGAAGAAAGTGGAAACATCCTGGCCAAACAATGGGAAACATTCAGGTTTCCGGAATGGTCGTTTACCAATGAAAATGTCAAACCGAGCACATGCCATATTTGAGTCCGCTAGAGGCCATCACGGGAGAAAATTACTTCAAACTGTGGATGACATCGATAGCGTCGTAATAAGTGACATTGTGGTAGTTAGTCAGGACGGAAGCGGAAACTTCACCACTATAAACGATGCCATAGCTGCCGCCCCAAATGACACTGTTGCCAGTGATGGCTACTTCTTGGTTTATATCACCGAAGGTGTGTATCAAGAATACGTAACCATAGCCAAAAACAAGAGGAACTTGATGTTATCCGGAGATGGCATCAATCGGACAATTATCACCGGTAATCGCAGTGTAGCGGATGGTTGGACAACGTTCAACTCAGCAACATTTGCTGTGTTAGCACCTGGGTTCGTAGCGGTTAATATAACGTTCCGAAACACGGCTGGGTCAAGCAAACACCAAGCAGTTGCAGTAAGAAATGGAGCAGATATGTCTACTTTCTACAGCTGCAGCTTTGAAGGGTATCAAGACACTCTGTATACACATTCTCTCAGGCAAATCTACAGAGAATGTGACATCTATGGCACCGTTGACTTTATATTCGGAAACGCTGCCGTTGTATTTCAAAATTGCAACATCTATCCCCGCTTACCTATGAGTGGGCAATTCAATGCCATAACTGCTCAAGGTCGAATTGACCCAAACCAGAACACAGGCACTTCCATACAGAACAGTATTATTAAGGCAGCCGACGATCTGATTCCCAGCGTTGCTACGGTGAAAACATACCTGGGAAGGCCATGGAAGCAATACTCGAGGACGGTTTATATGCAGTGTTTCATGGACAGTTTGATAGATGGTTCTGGTTGGAAAGAATGGGATGCAAATTTTGCATTGAGCACTTTGTACTACGCAGAGTATGATAACAGCGGACCTAGTTCAAACACTGGGAACAGAGTGACATGGCCTGGTTACCATGTGATTAATGCTACAGATGCAGCTAATTTTACAGTGTCTAATTTCTTGCAAGGGGATGTTTGGCTACCTCAAACTGGGGTTCCATTCTCAAGTGGATTGATTTAG 1686 0.4478 MAFKLFSLLALWLSLFVSLSIAQKHASPKAPPETICDSTVHPSYCKKMLANQHGNIYDYGRISVRKSLSQSRKFLNLVDSHLQGQSPLSQSTVRALEDCQFLAQLNFEYLSNTYTTVDQSSDVLPSSEAEDVQTSLSAILTNQQTCLDGLETTASDSRVKNDLSVPLSDDTELHSVSLALFMKGWVPQKKVETSWPNNGKHSGFRNGRLPMKMSNRAHAIFESARGHHGRKLLQTVDDIDSVVISDIVVVSQDGSGNFTTINDAIAAAPNDTVASDGYFLVYITEGVYQEYVTIAKNKRNLMLSGDGINRTIITGNRSVADGWTTFNSATFAVLAPGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYSCSFEGYQDTLYTHSLRQIYRECDIYGTVDFIFGNAAVVFQNCNIYPRLPMSGQFNAITAQGRIDPNQNTGTSIQNSIIKAADDLIPSVATVKTYLGRPWKQYSRTVYMQCFMDSLIDGSGWKEWDANFALSTLYYAEYDNSGPSSNTGNRVTWPGYHVINATDAANFTVSNFLQGDVWLPQTGVPFSSGLI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3364 561 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Glsi02g3364 561 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Glsi02g3364 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 181 IPR035513 -
Glsi02g3364 561 FunFam Pectinesterase 241 560 - -
Glsi02g3364 561 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Glsi02g3364 561 SUPERFAMILY Pectin lyase-like 243 559 IPR011050 -
Glsi02g3364 561 FunFam Pectinesterase 33 183 - -
Glsi02g3364 561 Gene3D - 242 560 IPR012334 -
Glsi02g3364 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 183 IPR035513 -
Glsi02g3364 561 PANTHER PECTINESTERASE 20 550 - -
Glsi02g3364 561 SMART PMEI_2 27 180 IPR006501 GO:0004857
Glsi02g3364 561 CDD PMEI-like_3 34 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3364 Glsi-ChrGlsi02 81284095 81285882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3364 1 561 Carbohydrate Esterase AT4G02330 59.201 0.0 687