Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3342 ATGATCACTACGGCACGCCTCATGCTACTGCTTGCGTTTTTGTGTCTTTCGTTCCTAACAAATACAGGCCAAATGGTATCTGCAAGAAGGAACGATTATGCTAGAGATGCTTGCAGAGTGACCAGATATCCAGATCTATGCTTCCACTCGCTGGGACCATTTTCTAGCACTGCTAAACGAAGCCCGAGCAAGTGGGCGCGGGCAGGAGTGTCGGTGACAATAGGAGAGGTTAAGAATGTTCAAGCATATCTTACAAAACTGAAGGGAAACCGGTTTATAAGAGGAAGAAACAGAGTTGCCCTTTCAGATTGTATTGAGTCTTTTACAGATGCCCTTGACGAGCTTCACAGATCACTTGGTGTACTCAGAAGGCTAAGCAGAAGCACATTTAGTACCCAGATGGGGGACCTTAATACTTGGATAAGCGCAGCTCTCACTGACGAAGACACTTGCCTTGATGGGTTTGAAGGCCAAAAGGGAGGGAAACTTAAATTGCTGCATAATCGAGTTCTGAATGCCTCCTATATAACCAGTAATGCTCTTGCTCTCGTGAACAAACTTGCCACTACAGGTTTGGGAAGCATCAACGATCCGTAG 597 0.459 MITTARLMLLLAFLCLSFLTNTGQMVSARRNDYARDACRVTRYPDLCFHSLGPFSSTAKRSPSKWARAGVSVTIGEVKNVQAYLTKLKGNRFIRGRNRVALSDCIESFTDALDELHRSLGVLRRLSRSTFSTQMGDLNTWISAALTDEDTCLDGFEGQKGGKLKLLHNRVLNASYITSNALALVNKLATTGLGSINDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3342 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 187 IPR035513 -
Glsi02g3342 198 CDD PMEI-like_3 37 189 - -
Glsi02g3342 198 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Glsi02g3342 198 Pfam Plant invertase/pectin methylesterase inhibitor 34 183 IPR006501 GO:0004857
Glsi02g3342 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Glsi02g3342 198 FunFam Pectinesterase inhibitor 3 29 188 - -
Glsi02g3342 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Glsi02g3342 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3342 Glsi-ChrGlsi02 81177370 81177966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3342 35 195 Carbohydrate Esterase AT3G14310 32.121 6.73e-20 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3342 02 81177370 81177966 Glsi02g3342 02 81177370 81177966 ECH