LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g3316	ATGTCTTCGGAAGACACTGCAGGTAAGCATGAAGGAGGAATAACTAGGGAGAAGCAAGCGGCTTCTGATCATCCAGGCCTTAACTTGCGACGCAATGATTCTTTCGACATCGAATCCGGTAGCTTTTCGAATCCCCATTCCTCTAAGGGGCCAGCGTTGTGGGTGATCATGCAGCTTGCATTTCAGAGCATGGGAATTGTGTACGGTGACATCGGAACGTCTCCGTTGTATGTGTTTTCAAGTACCTTCGCCGACGGCATCCACCACAATGATGATATTTTGGGTGTTCTTTCGTTGATATTTTATACCCTCACCCTCATCCCTCTCTTCAAGTACGTCTTCGTCGTTCTACAGGCCAATGACAATGGAGAGGGAGGGACGTTCGCTTTGTACTCTCTAATATGTCGTTATGCTAAAGTGGGACTAATCCCGAATGAGCAAGTGGAGGATGCAGAAGTGTCTAACTATCACTTAGAGTTACCGAGGAGCAGTCGTATGAAAAGGGCTTCAAGGCTCAAGTCTATGCTAGAGAATAGCCACTTTGCCAAGTTTTTCCTTTTGTTGGCTACTATGCTTGGTACTTCCATGGTCATCGGCGATGGTGTTCTCACTCCCTGCATGTCTGTTTTATCTGCTGTGAGTGGGATCAAGCAAGCTACTTCTGCAATGACAGACGATAGGGTTGTTTGGATATCCATAGTAATCCTGATCGGCCTTTTCATGGTTCAGAGATTCGGGACTGATAAAGTGGGCTATAGTTTTGCTCCCATTATCTGTGTTTGGTTCGCCTTCATCGGAGGCATTGGTGTTTACAATTTCATCAAGTATGATCCCACTGTCATCAAAGCAATAAATCCAATATACATAATAGATTACTTCAGCAGGAACAAGAAAAATGCTTGGATCTCTCTTGGTGGCGTTGTGCTCGCCATAACAGGAACTGAAGCAATGTTTGCTGATGTTGGGCATTTCACAGTCCGTTCCATACAGATAAGTATGTGCTCTTTGACATACCCTGCTCTCATATTGGCCTACACTGGACAAGCCTCCTTTCTCCGCAAAAACACCGATCATGTTGCAGACACCTTCTTCAAGTCCACACCGGACCCTTTATATTGGCCAATGTTTGTGATCGCTGTTTTGGCATCAATCATAGCTTCTCAAGCCATGATCTCTGGGACTTTCTCGATAATCCAACAATCCCTAGCACTTGGGTGTTTTCCCCGGGTGAAAATTGTACACACATCGGCTAAGTATGAAGGACAAGTTTACATCCCTGAAATCAATTTCATCCTCATGGTAGCTTGTGTTGCCGTCACTGCTGGGTTCAAAACCACCACAAAAATTGGCAACGCTTACGGGATAGCAGTGGTGTTTGTGATGACGCTGACATCTGCCTTTATTGTACTAATCATGATAATGATATGGAAGACTCACATACTTCTGGTTATCAGCTATATAGTCGTCATTGGCTCTGTGGAGCTTCTGTATTTAAGCTCAGTGCTATACAAATTTGACCAAGGAGGGTATCTTCCTCTGGCTTTTGCTGCGGTGCTAATGAGCATCATGTATATTTGGAACAATGTGTACCGAAGGAAGTACTACTATGAGCTGAATCACAAGACGTCTCCGGCGAAGCTTAAGGAGATTGCTGCTGACACAGACTTTTGTCGAATCCCCGGTCTAGCCATGTTCTACTCTGAGCTTGTTCATGGAATCCCTCCTATTTTCAAGCATTATGTGGCAAATGTGCCTGCACTACACTCTGTCCTTGTCTTTGTGTCCATTAAGTCACTGCCTATCAGCAAAGTTCCCATGGAAGAGAGGTTTCTTTTTCGTCGAGTAGAACCTAAGGAACTCAATGTCTTTCGTTGTGTTGCAAGGTACGGATACAATGATGTGCGGAACGAGCAAGAGCCATTTGAGAAGGTGTTGATTGAAAGGTTGAAGGAATTTATTGCTAAAGAATATTGGATGTCCCAGAAAATTATGCTTCCAAGTAGTGAAACTGAAGGAAAATTGGAAGGTGGAGGCGAAGAAGTTGATGGAGTAGAAGGAGTTGGTTATGATCAAGAGAGGCTACGAGAGGCTATTGAGAGGGAGATTGAGACAATTGAGAAAGCAACGACAGCGGGTGTCGTCCACTTGATGGGGGAGAATGAGGTGATTGCTAGCAAAGGAGCTGGCGTTTGGGATAGGATTCTGATAGATCACGCTTATAATTTCCTGAAGAGAAACTTGAGACAGAGTGAAAAAGTATTTGATATTCCTCACAAGCGCATGGTCAAAGTGGGAATGAAATATGAGCTATAG	2313	0.4436	MSSEDTAGKHEGGITREKQAASDHPGLNLRRNDSFDIESGSFSNPHSSKGPALWVIMQLAFQSMGIVYGDIGTSPLYVFSSTFADGIHHNDDILGVLSLIFYTLTLIPLFKYVFVVLQANDNGEGGTFALYSLICRYAKVGLIPNEQVEDAEVSNYHLELPRSSRMKRASRLKSMLENSHFAKFFLLLATMLGTSMVIGDGVLTPCMSVLSAVSGIKQATSAMTDDRVVWISIVILIGLFMVQRFGTDKVGYSFAPIICVWFAFIGGIGVYNFIKYDPTVIKAINPIYIIDYFSRNKKNAWISLGGVVLAITGTEAMFADVGHFTVRSIQISMCSLTYPALILAYTGQASFLRKNTDHVADTFFKSTPDPLYWPMFVIAVLASIIASQAMISGTFSIIQQSLALGCFPRVKIVHTSAKYEGQVYIPEINFILMVACVAVTAGFKTTTKIGNAYGIAVVFVMTLTSAFIVLIMIMIWKTHILLVISYIVVIGSVELLYLSSVLYKFDQGGYLPLAFAAVLMSIMYIWNNVYRRKYYYELNHKTSPAKLKEIAADTDFCRIPGLAMFYSELVHGIPPIFKHYVANVPALHSVLVFVSIKSLPISKVPMEERFLFRRVEPKELNVFRCVARYGYNDVRNEQEPFEKVLIERLKEFIAKEYWMSQKIMLPSSETEGKLEGGGEEVDGVEGVGYDQERLREAIEREIETIEKATTAGVVHLMGENEVIASKGAGVWDRILIDHAYNFLKRNLRQSEKVFDIPHKRMVKVGMKYEL	770

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g3316	770	MobiDBLite	consensus disorder prediction	1	29	-	-
	Glsi02g3316	770	MobiDBLite	consensus disorder prediction	1	18	-	-
	Glsi02g3316	770	Pfam	K+ potassium transporter	60	633	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi02g3316	770	Coils	Coil	691	711	-	-
	Glsi02g3316	770	NCBIfam	potassium uptake protein	59	769	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi02g3316	770	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	55	769	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g3316	Glsi-ChrGlsi02	81025201	81029089	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g3316	5	770	Inorganic Solute Cotransporters	AT4G13420	54.003	0.0	862