Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3312 ATGGAGGCATTGAAGGACGATTTTTCAGAGCTAGAAATAGGGAGTTCCGTGGAGTCGTTCCAGAAGTTCTTGGTTTCGCAAAGGGAGCTCTTCCATAGCCAGATCGATCAGTTTCAGAAAATTGTCACCACGCAATGCAAACTCGGTGGCGTCAATCCTCTCTCTCAAGAAATGTTAACTGGAGTTAATCTTCAGCCTACTCTTAAAGGAAAAAGACCTAGGGATTTGTTAAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTCACCATTAAAGATGCAATTAGTAAGAAAGAATCCCGTGAGCTCTGTGCTTTATTTGGCATCACAGTGACACAGATTCGTGAGTTTTTTACTAGTCAACGCTCAAGAGTGAGGAGGGTAGTTCGATTGTCAAGGGAGAGAGCAATGAGATCTAATTCTTGTGAAGAAGCTCATGATGGATTCCCATTAAACTCCGATCCTATGAGGCCAATCAATCTAGCTCCCTTAAATTCTGCTGGCCCCACCATTGTTGAAGAAGCATCTTGTTCAACAGAGGATAATGCTTTGCCTGTCCTGGCTGACTTAGATAAACATTTTGTTGATAATATTTTTATTTTAATGCGGAAAGAGGAAACGTTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGAAGATACATAGTTCTTCAGTATTATTTTGGTTCTTAAGCAGTGGAGGTGTGATGATTTTAGCAACTTGGTTGGGTGAAGCAGCTCTTGAAGAGCAAACAAGTGTTCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCACTACATAAAGCCCTTCCTATGCACATGTCAGCTATATTGCAATGTGTTAATAGGCTGCGGTTCTACAGGACATCAGGTTCTCATATTGCTTTATATGTTGTATTACTTGGTGTTAATAGCACAATTGATATTAGAAATATCATCGGTGAGAGGCAACTGCAGAATATGCACAAACAGATAGAGAGCCTCATTGGTCAAATAATGGGTACTGAATCACGGCACTCACATTTTGATGTTACTGAACACATTCTTGCCCTCTCAAATGAAGGTTCAGATAATGTCAGGAAAGTGGAATCTCCACAAGCTGTGAAACTGTTGGCAGCCTCTTTGGATGATTCAACTAAGAAGCCTGTCTTGGGTGTATCTTCATTTCGTATCCTTGTGGATGAGAATTCATGTGATTCCAAGATTTGTTTATGGGTTGTATTGAGCCTTAAGCAAGTAGATTGCCCAGGAAAAACATATGTGTTACTATTAGCTAATCATCAATGGTCTCTTGCCTTTTATTAAACTAGGGAGCGCAGAAAAGTGTTGTTGGTGGACCAACCAGGCCACAAAACAGTGAACAGGAGCCCACAGGGCACAAGAGCGGTGCCTGTAAGTCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGCGCTTTATTTATGCAAAGCAGGTATGGGAAAACTAGTTCGTCAAAAGACGGTAAAGAATCAAAAGCCATTGTAGTGGCTTCATTATCTAGAGTTCCTCTTACACCCAAAATAGAGGAAGACAAGAAACGTCTGTTGATTCCCTCTAAAGTCTCTAGTAGGCAGGATGCTTCTCTTTATTCGAAACTGAGAACGGATTTGAAAGTAACACCTTGGGAGAAGTGCGAGAGGGTGCAAATATCATGGAAGACACCAGCAGAGCACAACTGTGCTGATAACAGCTCCAATGCTATAATGACGTTTGGGCTATCTGGTTCTTTATTTTTGGTGGCAGATCTTGGAGTTTTTGGTTTTATTTATTGCTTCCACTGTGCATGCATTCCACAAGGCGACCTAGAATATGAAGTTGTAACTTAACTGAAACTTAACGATGCCTGGAGTGTTGGTGCTGGTGAAAACAGCAAAGAGGTTGATGTCCAGAAGAAGAGAAATCGACGGGAGAAGGAAATTATTTATCAGACCGTCCAGGACATTCCATCTAACCCGAAGGAGCCATGGGACCTCGAGATAAACCATGATGACACTTTGACACCGGAAATTCCTATTGAGCAGCAGCCAGATAGTGATGGTGCCGACACACCAGTTGCCCCTAATGAAACCCATACCGTTCAAGTGGCGGCTACCTCATCTTCAAACTGTAATGCAGGTGCTGCTGAACCTGATTTAGAGCTGCTTGCTGTACTGCTAAAAAATCCAGAACTGGTATCTGCCTTGACTTCTGGACAAGCTGGTAGCTTACCCAGTGCGGAAACTGTGAAGCTGCTTGACATGATCAAGAAAGGTGGTACCAATATGGCTGGAAATATAAATGGCATGGGTGGAGAGGCGCAGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACTCCTTATAGCGATCCAAGACCGAGTGGATGGAGGACAGAAGCTGTAAAGAATCCTTTTTTACGGCAAACTTCAGTGCCTGACAGTACTATCTACACCTCCCCATTAGCAGCAACTACCAACTTGGGGTTTTCTCAGATTCCAGCCACTGGCATTGCGGTACAGCCAATAAATGTGCCTCTATCTTCCCAGCAGCTAGCAGCAGCAGTTGCTCCATATTCACTGCCTCATGCAACTAATATTGTTCCGGAAAGGCAACCACCACCTGCTCTCTCCTCTGTGCGTCCTAGTCTTCATACCAATTATCCAACAATACAAACACCATCTTCTGATACAGGTTTAACCATGAAGAACAACATAATCACTGCAAATGCATCTTCAGTTAACTTATCCAGTGCACATTCACCTTTATCAATGCGGGTTGATGGCACGAGTAATTTAAAACCAGTGCCTAATACATTCTTACCAATTTCAGAGGAATTTTCTAGTACATTCTTACAATCTTTCGTGTTGCCCTCACCAACGACTCCAATTTCAGCAACACGGTTACAAAGACATCCAAATTTATTGCAGCAGTCCCATTTCTCTGAGCCTTCCTGTCAGACTCCTTCACACTCTTATCCTCCACAAACCCAAAAACAAGGCGCCATGTCAGATTCTTGGAGAGATAGACAGGATATGTCTTCCCATTATCATCCTCAACTAAATCAAAACAACTATAAGGCATTGGTTGGGGGATACATGCAACCTGGTTCTTCTCGGGAGAGAAATGACTGTGCTGGGGAAGAATTTGAATCATGGAGTCCGGAGAATAGCCCAAGTAAAAATTCTGGGTATTCTAGAAGAAATCTCCCTGAATCTAGAGTGAATCCTGAGAGGAATTACAGGCCTGAATGGTCAAGACAACGGAGTTCTTCTGGGTACTGGGATACAGGTAGGCAGGGGAACAGAAAGTGGCATGATCAGAGACGATGA 3342 0.4291 MEALKDDFSELEIGSSVESFQKFLVSQRELFHSQIDQFQKIVTTQCKLGGVNPLSQEMLTGVNLQPTLKGKRPRDLLNPKAVNYMQSVFTIKDAISKKESRELCALFGITVTQIREFFTSQRSRVRRVVRLSRERAMRSNSCEEAHDGFPLNSDPMRPINLAPLNSAGPTIVEEASCSTEDNALPVLADLDKHFVDNIFILMRKEETFSGQEKLMEWILKIHSSSVLFWFLSSGGVMILATWLGEAALEEQTSVLLLILKVLCHLPLHKALPMHMSAILQCVNRLRFYRTSGSHIALYVVLLGVNSTIDIRNIIGERQLQNMHKQIESLIGQIMGTESRHSHFDVTEHILALSNEGSDNVRKVESPQAVKLLAASLDDSTKKPVLGVSSFRILVDENSCDSKICLWVVLSLKQVDCPGKTYVLLLANHQWSLAFYXTRERRKVLLVDQPGHKTVNRSPQGTRAVPVSQGRPMSADDIQKAKMRALFMQSRYGKTSSSKDGKESKAIVVASLSRVPLTPKIEEDKKRLLIPSKVSSRQDASLYSKLRTDLKVTPWEKCERVQISWKTPAEHNCADNSSNAIMTFGLSGSLFLVADLGVFGFIYCFHCACIPQGDLEYEVVTXLKLNDAWSVGAGENSKEVDVQKKRNRREKEIIYQTVQDIPSNPKEPWDLEINHDDTLTPEIPIEQQPDSDGADTPVAPNETHTVQVAATSSSNCNAGAAEPDLELLAVLLKNPELVSALTSGQAGSLPSAETVKLLDMIKKGGTNMAGNINGMGGEAQEKVEVSLPSPTPYSDPRPSGWRTEAVKNPFLRQTSVPDSTIYTSPLAATTNLGFSQIPATGIAVQPINVPLSSQQLAAAVAPYSLPHATNIVPERQPPPALSSVRPSLHTNYPTIQTPSSDTGLTMKNNIITANASSVNLSSAHSPLSMRVDGTSNLKPVPNTFLPISEEFSSTFLQSFVLPSPTTPISATRLQRHPNLLQQSHFSEPSCQTPSHSYPPQTQKQGAMSDSWRDRQDMSSHYHPQLNQNNYKALVGGYMQPGSSRERNDCAGEEFESWSPENSPSKNSGYSRRNLPESRVNPERNYRPEWSRQRSSSGYWDTGRQGNRKWHDQRR 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 869 902 - -
Glsi02g3312 1113 SMART HOX_1 70 132 IPR001356 GO:0003677
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 1056 1073 - -
Glsi02g3312 1113 SUPERFAMILY Homeodomain-like 69 133 IPR009057 -
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 451 470 - -
Glsi02g3312 1113 ProSiteProfiles 'Homeobox' domain profile. 68 128 IPR001356 GO:0003677
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 452 466 - -
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 663 709 - -
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 882 902 - -
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 979 1113 - -
Glsi02g3312 1113 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 108 1097 - -
Glsi02g3312 1113 MobiDBLite consensus disorder prediction 979 1007 - -
Glsi02g3312 1113 Gene3D - 69 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3312 Glsi-ChrGlsi02 80998503 81011223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3312 614 815 Homeobox Transcription Factor Family AT4G02560 50.000 4.35e-44 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3312 02 80998503 81011223 Glsi02g3312 02 80998503 81011223 ECH