Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3290 ATGGATCCATATTCCACAGCGCATGTGGCAACCACTATTCAACTCTTTCATCTGTGTTTCTTAATTTACGATGGCTCCAATGTTTCGCGGTCTTTCAACTTCCTGGTTAGGTCCCTGCCTTCCATTCAAAGTTCTTTCTCCTTCACTCTGTCTCGCCCTCGTAGACGAAGCCCTACAATCTTCTATGACGCAAAGGAGTTAAGGAAAACATGTGTTGTCAGGGCTGTCATGTTGAACTCTTTTCTCTCGAACTTGGGGGCTTGGTCCTCTGATAATGATGCTTCTGTAGATTCCATGACTCTATTTGTGCTTCTTCTTTGTGCGTGTGTTGTGATTGGGCATCTTCTGGAAAAGAGCCGATGGATGACCGAGTCAGTCATTGCCCTACTCATTGGACTTTTGACTGGAACCATCATTCTACTAACAACTCGGGGAAAAAGTTCACACATATTATTATTTAATGAAGAACTTTTCTTTATATATCTTCTTCCACCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTCTTGGCAATAATTTTGTATGGTGTTGTTGGCAGTATGATATCATTTCTCATTGTATCACTGGGTTCGATTCAGTTATTCAAAAAATTGGACATTGGTTTATTGGACTTGGGAGACTATTTCGCACTAGGAGCAGTATTTTCTGCTACAGATTCAGTCTGCACGTTGCAGGTGCTCAATCAGGAAGAGACGCCTCTTCTATACAGTCTAGTTTTCGGTGAAGGTGTGGTCAATGATGCAACATCTGTGGTTCTCTTTAACGCAATTCAGAAATTTGATCTCTCTCACATCACCTCAGCCAATATCTTGCAGTTTGTCGGCAGTTTTTTATATTTATTCCTGACAAGCACTTTGCTGGGATTTGCAGTTGGCTTGCTTAGTGCCTACATTATAAAGAAGTTGTATATTGGCAGGCATTCCACTGATCGAGAATTTGCTCTTATGATCCTGATGCCTTATTTGTCTTATATGATGGCTGAGCTTCTCGATTTAAGTGGGATCCTTACTGTGTTTTTTTGTGGGATTGTCATGTCGCACTACACTTGGCACAATGTTACTGAATATTCTAGAGTCACAAGCAGGCATGCTTTTGCAACTTTCTCATTTGTCTCTGAGATTTTTATATTCTTATATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAAATTTGCGAGCAAAAGTCCTTGGACGTTAGTTGGGGCAAGTGCAATGCTGCTTGGCTTGGTTCTGCTTGGAAGGGCGGCTTTTGTGTTCCCTCTGTCATTTATAGCCAATTTATTTAGGAAGTCTAAGGGAGACAAGATTGCAATTAAGCAGCAGGTCGTAATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCAGTGGCTCTTGCATATAATAAGTTTGCTAGATCAGGACATACTCAACAGCAAGGGAATGCTATCATGATTACCAGCACCATCACAGTCGTTCTCTTAACTAACGTGGTGGGTGGATTATTGACTAAGCCTCTGATAAGGTGGTTGCTGAATCCCCAGAAGAAGCATTTAGACAGCTCAATGCCTTTGGACTTTATGTCTGATAAGTCTGAGACTCTTCCATTACTGCCCAATGGGCAAGATTCAGAATCTAATAGAGACACGGGCAACTCCATTGATTCCAATCACATCGTTCATTACTATTGGCGAATGTTTGATGATACATTTATGCGCCCTATTTTTGGTGGGAGAAGATCTGTTCCTGGTTCTCGCACAGAGATGCATTAG 1794 0.4186 MDPYSTAHVATTIQLFHLCFLIYDGSNVSRSFNFLVRSLPSIQSSFSFTLSRPRRRSPTIFYDAKELRKTCVVRAVMLNSFLSNLGAWSSDNDASVDSMTLFVLLLCACVVIGHLLEKSRWMTESVIALLIGLLTGTIILLTTRGKSSHILLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVVGSMISFLIVSLGSIQLFKKLDIGLLDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSANILQFVGSFLYLFLTSTLLGFAVGLLSAYIIKKLYIGRHSTDREFALMILMPYLSYMMAELLDLSGILTVFFCGIVMSHYTWHNVTEYSRVTSRHAFATFSFVSEIFIFLYVGMDALDIEKWKFASKSPWTLVGASAMLLGLVLLGRAAFVFPLSFIANLFRKSKGDKIAIKQQVVIWWAGLMRGAVSVALAYNKFARSGHTQQQGNAIMITSTITVVLLTNVVGGLLTKPLIRWLLNPQKKHLDSSMPLDFMSDKSETLPLLPNGQDSESNRDTGNSIDSNHIVHYYWRMFDDTFMRPIFGGRRSVPGSRTEMH 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3290 597 Gene3D - 96 525 IPR038770 -
Glsi02g3290 597 PANTHER SODIUM/HYDROGEN EXCHANGER 90 588 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Glsi02g3290 597 Pfam Sodium/hydrogen exchanger family 102 517 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi02g3290 597 PRINTS Na+/H+ exchanger signature 157 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi02g3290 597 PRINTS Na+/H+ exchanger signature 186 194 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi02g3290 597 PRINTS Na+/H+ exchanger signature 226 236 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi02g3290 597 PRINTS Na+/H+ exchanger signature 171 185 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi02g3290 597 NCBIfam sodium/hydrogen exchanger 3 99 525 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3290 Glsi-ChrGlsi02 80837580 80844173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3290 77 595 Antiporters AT3G05030 66.604 0.0 713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3290 02 80837580 80844173 Glsi02g3290 02 80837580 80844173 ECH