LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g3290	ATGGATCCATATTCCACAGCGCATGTGGCAACCACTATTCAACTCTTTCATCTGTGTTTCTTAATTTACGATGGCTCCAATGTTTCGCGGTCTTTCAACTTCCTGGTTAGGTCCCTGCCTTCCATTCAAAGTTCTTTCTCCTTCACTCTGTCTCGCCCTCGTAGACGAAGCCCTACAATCTTCTATGACGCAAAGGAGTTAAGGAAAACATGTGTTGTCAGGGCTGTCATGTTGAACTCTTTTCTCTCGAACTTGGGGGCTTGGTCCTCTGATAATGATGCTTCTGTAGATTCCATGACTCTATTTGTGCTTCTTCTTTGTGCGTGTGTTGTGATTGGGCATCTTCTGGAAAAGAGCCGATGGATGACCGAGTCAGTCATTGCCCTACTCATTGGACTTTTGACTGGAACCATCATTCTACTAACAACTCGGGGAAAAAGTTCACACATATTATTATTTAATGAAGAACTTTTCTTTATATATCTTCTTCCACCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTCTTGGCAATAATTTTGTATGGTGTTGTTGGCAGTATGATATCATTTCTCATTGTATCACTGGGTTCGATTCAGTTATTCAAAAAATTGGACATTGGTTTATTGGACTTGGGAGACTATTTCGCACTAGGAGCAGTATTTTCTGCTACAGATTCAGTCTGCACGTTGCAGGTGCTCAATCAGGAAGAGACGCCTCTTCTATACAGTCTAGTTTTCGGTGAAGGTGTGGTCAATGATGCAACATCTGTGGTTCTCTTTAACGCAATTCAGAAATTTGATCTCTCTCACATCACCTCAGCCAATATCTTGCAGTTTGTCGGCAGTTTTTTATATTTATTCCTGACAAGCACTTTGCTGGGATTTGCAGTTGGCTTGCTTAGTGCCTACATTATAAAGAAGTTGTATATTGGCAGGCATTCCACTGATCGAGAATTTGCTCTTATGATCCTGATGCCTTATTTGTCTTATATGATGGCTGAGCTTCTCGATTTAAGTGGGATCCTTACTGTGTTTTTTTGTGGGATTGTCATGTCGCACTACACTTGGCACAATGTTACTGAATATTCTAGAGTCACAAGCAGGCATGCTTTTGCAACTTTCTCATTTGTCTCTGAGATTTTTATATTCTTATATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAAATTTGCGAGCAAAAGTCCTTGGACGTTAGTTGGGGCAAGTGCAATGCTGCTTGGCTTGGTTCTGCTTGGAAGGGCGGCTTTTGTGTTCCCTCTGTCATTTATAGCCAATTTATTTAGGAAGTCTAAGGGAGACAAGATTGCAATTAAGCAGCAGGTCGTAATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCAGTGGCTCTTGCATATAATAAGTTTGCTAGATCAGGACATACTCAACAGCAAGGGAATGCTATCATGATTACCAGCACCATCACAGTCGTTCTCTTAACTAACGTGGTGGGTGGATTATTGACTAAGCCTCTGATAAGGTGGTTGCTGAATCCCCAGAAGAAGCATTTAGACAGCTCAATGCCTTTGGACTTTATGTCTGATAAGTCTGAGACTCTTCCATTACTGCCCAATGGGCAAGATTCAGAATCTAATAGAGACACGGGCAACTCCATTGATTCCAATCACATCGTTCATTACTATTGGCGAATGTTTGATGATACATTTATGCGCCCTATTTTTGGTGGGAGAAGATCTGTTCCTGGTTCTCGCACAGAGATGCATTAG	1794	0.4186	MDPYSTAHVATTIQLFHLCFLIYDGSNVSRSFNFLVRSLPSIQSSFSFTLSRPRRRSPTIFYDAKELRKTCVVRAVMLNSFLSNLGAWSSDNDASVDSMTLFVLLLCACVVIGHLLEKSRWMTESVIALLIGLLTGTIILLTTRGKSSHILLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVVGSMISFLIVSLGSIQLFKKLDIGLLDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSANILQFVGSFLYLFLTSTLLGFAVGLLSAYIIKKLYIGRHSTDREFALMILMPYLSYMMAELLDLSGILTVFFCGIVMSHYTWHNVTEYSRVTSRHAFATFSFVSEIFIFLYVGMDALDIEKWKFASKSPWTLVGASAMLLGLVLLGRAAFVFPLSFIANLFRKSKGDKIAIKQQVVIWWAGLMRGAVSVALAYNKFARSGHTQQQGNAIMITSTITVVLLTNVVGGLLTKPLIRWLLNPQKKHLDSSMPLDFMSDKSETLPLLPNGQDSESNRDTGNSIDSNHIVHYYWRMFDDTFMRPIFGGRRSVPGSRTEMH	597

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g3290	597	Gene3D	-	96	525	IPR038770	-
	Glsi02g3290	597	PANTHER	SODIUM/HYDROGEN EXCHANGER	90	588	IPR018422	GO:0006812\|GO:0015385\|GO:0016020\|GO:1902600
	Glsi02g3290	597	Pfam	Sodium/hydrogen exchanger family	102	517	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Glsi02g3290	597	PRINTS	Na+/H+ exchanger signature	157	168	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Glsi02g3290	597	PRINTS	Na+/H+ exchanger signature	186	194	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Glsi02g3290	597	PRINTS	Na+/H+ exchanger signature	226	236	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Glsi02g3290	597	PRINTS	Na+/H+ exchanger signature	171	185	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Glsi02g3290	597	NCBIfam	sodium/hydrogen exchanger 3	99	525	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g3290	Glsi-ChrGlsi02	80837580	80844173	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g3290	77	595	Antiporters	AT3G05030	66.604	0.0	713

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi02g3290	02	80837580	80844173	Glsi02g3290	02	80837580	80844173	ECH

Showing 1 to 1 of 1 entries