Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3279 ATGGCTGATGCCTCAATCGCTGAGGCCTATACCTCTTATTCTTTTTCTCCACATTCATCCCCACTTGGAACTAACGTCAAAGATGCAAATGAAGATGTGTACCAGCAATTTCAGGAGACAGAGCTTTTCGAAGACACCTTTGTGCTCCATAGTCCCTTGGTTGAAACTCATGTGGAAACTTTCAATCTGAATTCTGAGCCAGTGGAATATTCAGACCCTGTAGAAACCATGGTAACTGGTCCAATACGTCCATACGAACAAGAAGTAGTTCTTGATAGTGAGGATGAAGAAATGCATGTCAGTAAAGTTGTCACTGTTGTCAAAGGGTTATGGGATGAAGAAACTGATCGAACAATGAAAAATCCTTCGATAAAGTTCCAGAAAAGGCAGCTTGAGCCACCTCCACCTAGTAAGCAAACGGAGGAGAGAGCAGCAAACTCAAGCGTCATCGCTTCTGGAAAATCTGTTGCTGGGGATAAAGGAGCTTCAATTGATGCTGAGAGCTCTGATGATAAACATAATCTACATCTGTCTACAAGGTTGAATCAAACACCCTCTCCAGAGCCAGGGGAATTAACCCAAGCCAATGCACTTGGCTATGTGGATCAGTACTTGTCATTAAACAATGTGGAATTATGTCAAGGAATTTGCCACAGAAAGGCCACCAGAGAGAAGTCACCTCCTGTCCTAAGCGCAAGAGGGCCACAAGGTTTAGCTAAGATTATCCAAGTTCGGACCCATGATGAAGAAAAAGGACACTTCAAATGGGTTGATAATGATCAAAATGACAGAGGAGCTAGTATATTTTGTAAGAAGATTGAAAAATCTTCAAACTTTGCAGTCTGTGGACAGACATATGCAAGAAGACAAAAGAAGTGTAAATATACTGAGAACCAAGGAAACTGCAGCACAGGTAATAGATGTAAAGAGAGGTTGGTGCAAGGACCAGGAACAGCATCTGAAAATAATAAGCCTATCAAGAAGTTGGATGTTCCGTTCGATGCCGCAACAGAGAACGTTGAAGCTTATTCTGGTGAGATACATACAGAGGACATGTTTGATATTGGTTTAAACACCCAAATAGCTGCTGAAGCTATGGAGGCCTTAGCCTGTGTGCCCCCTCCTGAGAGCAGAAGGACAAGGATCAAAGATCGATCAAGCAATCATAGGAAGAGGAACAATAATGTTACGGGGGGAGGTATTCTGAGACATAAAAGGAAGAGGAGTGGTTTGATGGCTGATCCATTCAAGTTGGTTGGTGAGGCAAAATATGTCAAATTTCCTTCACGTTCGCGTGGGGTGGCTAGAAAGCTCAGGTTGAATTGTCAGGTTCAAGAGAATCCGCAGCTATCCACAAGCCGCAGTTTTTTTACGCTCAATTCATGGGATTATCCGAAGGGACCAAGAGGGAAAAGAAAACGTCGTAATGTGCAAAGCCATCCAGATGCAACTATAAATTTGTGTATTCAATCTATGATAGTCAATGGAAAAGAAAACGACACCTACCCTACTAGAAGTCAGAGAGTTCTAGAAGGCCAAGATGATGTGAAGATGTCATGTTTTTCTTATACCCACCCACTTTATACTGCTTCATGTATTGACACAGGCACCAGTGATGAAGGCAAAAATGTTTCAAACGCTGATTCTACATGCTATGAGCATCACAAAAAGCCATGCGATAAAAACCTGCCAAAATCTTCCCTTTTGAAGGAGCTAATCAGATTAGGAGTTTCTGGGTCCAGAATAGATCAGACAGGAAAAGATCTGAGACAACGAAGAGATATGTCATATGTTCGAGTTCTATTAAGCCAGCATTTGGATAACAGTATCATTAAGCAGCAAAAGAAGATTTTAACACGGATGAACATATCTATTGCATCATGCTCAGTGGAGGCCACACATTTTGTAGCGGACAAATTCACACGTACAAAGAATATGTTGGAAACCATGGCTCTTGGTAAATTAGTGGTGACACATTTATGGCTTGAGAGCTGTGGACAAGCAAACTGTTTTATTGACGAGAAAAATTATATTCTGCGAGATGTGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCTGTTTCTCTTGCTCGAGCAAGACAGCAGCCACTGCTAAGGGGTAAAAAAATCTTAATCACTCCGTGCATTAAACCTGATAACAAAGTGATCACAAGCTTGGTAACTGCTGTTCGTGGCCAGGTAGTGGATGAACGTGAGATATATGCAGGCAAGAATGTTAAGGTCATAGATGATCTGTTGATTCTTTCTTGTGAAGAAGATTATGCAATATGCCAACCATTCCTTGAGAGAGGAATTGCCGTTTACGGTTCAGAGCTTCTCCTGAATGGAATAGTTATCCAGAAATTGGAACTTGAGAGACATCAACTCTTTATGAATCACGTTGCAAGGAATAACTTCAGCACATCTAGCCGTTTTGAGAAAGTTTACAGAAGGCGTTGA 2460 0.4159 MADASIAEAYTSYSFSPHSSPLGTNVKDANEDVYQQFQETELFEDTFVLHSPLVETHVETFNLNSEPVEYSDPVETMVTGPIRPYEQEVVLDSEDEEMHVSKVVTVVKGLWDEETDRTMKNPSIKFQKRQLEPPPPSKQTEERAANSSVIASGKSVAGDKGASIDAESSDDKHNLHLSTRLNQTPSPEPGELTQANALGYVDQYLSLNNVELCQGICHRKATREKSPPVLSARGPQGLAKIIQVRTHDEEKGHFKWVDNDQNDRGASIFCKKIEKSSNFAVCGQTYARRQKKCKYTENQGNCSTGNRCKERLVQGPGTASENNKPIKKLDVPFDAATENVEAYSGEIHTEDMFDIGLNTQIAAEAMEALACVPPPESRRTRIKDRSSNHRKRNNNVTGGGILRHKRKRSGLMADPFKLVGEAKYVKFPSRSRGVARKLRLNCQVQENPQLSTSRSFFTLNSWDYPKGPRGKRKRRNVQSHPDATINLCIQSMIVNGKENDTYPTRSQRVLEGQDDVKMSCFSYTHPLYTASCIDTGTSDEGKNVSNADSTCYEHHKKPCDKNLPKSSLLKELIRLGVSGSRIDQTGKDLRQRRDMSYVRVLLSQHLDNSIIKQQKKILTRMNISIASCSVEATHFVADKFTRTKNMLETMALGKLVVTHLWLESCGQANCFIDEKNYILRDVKKEKEIGFSMPVSLARARQQPLLRGKKILITPCIKPDNKVITSLVTAVRGQVVDEREIYAGKNVKVIDDLLILSCEEDYAICQPFLERGIAVYGSELLLNGIVIQKLELERHQLFMNHVARNNFSTSSRFEKVYRRR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3279 819 Gene3D BRCT domain 585 702 IPR036420 -
Glsi02g3279 819 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 116 378 - -
Glsi02g3279 819 CDD BRCT_MDC1_rpt1 609 672 - -
Glsi02g3279 819 ProSiteProfiles BRCT domain profile. 631 679 IPR001357 -
Glsi02g3279 819 MobiDBLite consensus disorder prediction 375 401 - -
Glsi02g3279 819 SUPERFAMILY BRCT domain 578 695 IPR036420 -
Glsi02g3279 819 Gene3D BRCT domain 703 803 IPR036420 -
Glsi02g3279 819 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 593 679 IPR001357 -
Glsi02g3279 819 CDD BRCT_PAXIP1_rpt6_like 704 790 - -
Glsi02g3279 819 MobiDBLite consensus disorder prediction 118 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3279 Glsi-ChrGlsi02 80779159 80783189 Wgd