Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3270 ATGGTAGGGGAAGTGACGCTGCAAAAGGTTTTCACCATGAGGCCAGAATTCTTCCTGTATGGCTGTGTGGTTCTTTTTAGTTTTTTTGTAGTTGGTCAAGGAGGCGACCTTAGGAAGAACTTCTACCGAGTTTCCTGTCCCAAGGCTGAGGAGATAATTAAGACAAGAACCACGCAGCTTGTCTCTGCAAACCCTGGTTTGCCAGCGCAGTTGCTGAGAATGTATTTTCATGACTGTTTTGTTAGGGGTTGTGACGCCTCAGTTTTGCTGAACTCCACCGCCAGCAATTCTGCTGAGAAGGAGGCAACTCCTAATCTAACTCTGGGAGGCTTTGATTCCATTGATGACGTCAAAGCAACAGTCGAAGCCCAATGTCCAGGAGTTGTATCCTGTGCTGACATACTGGCATTGTCTGCTAGGGACTCTGTTTCCATCCCCTTTAAGGAACCTCTGTGGGAAGTGCTTACTGGTAGAAGAGATGGCAGAGTGTCTTTAAGCACAGAGGCCTTGGCTAACATTCCAGCTCCTTTCTTCAACTTCACCCAACTCAAACAAAACTTCGCTAGCAAAAATCTTACTGTGCATGATCTGGTTGTGTTATCAGGCTCACACACAATCGGAATAGCTCATTGCAACTCCTTCAGCACCAGGCTGTACAACTTCACAGGTAACGGCGGTCAAGACCCTTCTTTGGACCCCACCTATGCTGCGTTCTTAAAGACAAAATGCACAAGCCTCAGTGACAATACCACAACAGTGGAGATGGATCCTAACAGCTCTACCTCATTTGACAGTAACTACTACTCTAACCTTCTTAAGAACAAGGGGCTGTTCCAATCAGATGCTGCACTTCTAACAACCAAGGTTTCAAGAAATATTGTCAACGAATTGGTTGACCTAGAAAGTTTCTTAACAGAGTTTGCTCAGTCAATGAAGAGAATGGGAAACATTGAGGTGCTTGCGGACACGAGTGGGGAAATTAGGAGCAAATGTTGGGCTGTCAACTCTTAA 1011 0.457 MVGEVTLQKVFTMRPEFFLYGCVVLFSFFVVGQGGDLRKNFYRVSCPKAEEIIKTRTTQLVSANPGLPAQLLRMYFHDCFVRGCDASVLLNSTASNSAEKEATPNLTLGGFDSIDDVKATVEAQCPGVVSCADILALSARDSVSIPFKEPLWEVLTGRRDGRVSLSTEALANIPAPFFNFTQLKQNFASKNLTVHDLVVLSGSHTIGIAHCNSFSTRLYNFTGNGGQDPSLDPTYAAFLKTKCTSLSDNTTTVEMDPNSSTSFDSNYYSNLLKNKGLFQSDAALLTTKVSRNIVNELVDLESFLTEFAQSMKRMGNIEVLADTSGEIRSKCWAVNS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3270 336 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 ProSiteProfiles Plant heme peroxidase family profile. 36 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 FunFam Peroxidase 40 179 - -
Glsi02g3270 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi02g3270 336 Pfam Peroxidase 56 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 Gene3D Peroxidase, domain 2 174 314 - -
Glsi02g3270 336 FunFam Peroxidase 174 314 - -
Glsi02g3270 336 Gene3D - 40 335 - -
Glsi02g3270 336 SUPERFAMILY Heme-dependent peroxidases 37 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi02g3270 336 CDD secretory_peroxidase 37 334 IPR033905 GO:0004601|GO:0042744
Glsi02g3270 336 PANTHER PEROXIDASE 25-RELATED 26 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3270 Glsi-ChrGlsi02 80731662 80733319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3270 27 336 Peroxidase AT1G05260 54.890 1.87e-118 343