Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3269 ATGGCCTCGCTGCTAATGCATTCCGATAGACTTCTGCATTTGTTCATTCAAAAACGAACTACAGTAGGGGAACTGACGTTGCAAAAGGTTTTCACCATGAGGCCAGAATTCTTCTTGTTAGCTTGTGTGGTTCTTTTTAGTTCTCTTGTGGGTTGTGATGCCTCAGTTTTGCTGAACTCCACCGCCGGCAATTCTGCTGAGAAGGATGCAATTCCTAATCTAACTCTGAGAGGCTTTGATGCTATTAATGACATCAAAGCAACAGTCGAAGCCCAATGTCCAGGAGTTGTATCCTGTGCTGACATACTGGCATTGTCTGCTAGGGACTCTGTTTCCATCCCCTTTAAGGAACCTCTATGGGAAGTGCTTACTGGTAGAAGAGACGGCAGAGTGTCTTTAAGCACAGAAGCCTTGGCGAACATTCCAGCTCCTTTCTTCAACTTCACCCAACTCAAACAAAACTTCGCCAGCAAAAATCTTACTGAGCATGATCTGGTTGTGTTATCAGGCTCACACACAATCGGAATATCCCATTGCAACTCCTTCAGCACCAGGCTGTACAACTTCACAGGCAATGGCGATCAAGACCCTTCTTTAGACCCCACCTATGCTGCGTTCTTAAAGACAAAATGCACAAGCCTCAGTGACAGTACCACAACAGTGGAGATGGATCCCAACAACTCTACCTCATTTGACAGTAACTACTACTCTAACCTTCTTCAGAATAAGGGGCTGTTCCAATCAGATGTTGCACTTCTAACAACCAAGGGTTCAAGAAATATTGTCAACGAATTGGTTGACCTAGAAACTTTCCTAACAGAGTTTGCTCAGTCAATGAAGAGAATGGGAAACGTTGAGGTGCTTGCGGGCACGAGTGGGGAAATTAGGAGCAAATGTTGGGCTATCACTACGTCACAAAGATTATATTTGTATCTCAGTTGGGATAATTGGAGCAATAATACTGTGAAGCTTTGGAAATTCGATGCAATTCTTGGGAAGTTACTGGTACACCAGATACAGGTCATCAAAGTTCATGGCAAGCTTATTCCCCATTCAGTAAAAAATTGGGTCGAACGCTATGAAGAGGATCCAAAACCTGCATTGGTTGAACTTTTAATAATGCTGTTTGAGGCGTGTAGAGCCAAGTATCATCACAGAGGAGATCTCCTGGATGAGACTGATGTTGATGATGTTGTGGTCGCCCTTGTCAACTGTGCTAAAAGGGGTGAAGTTGAAGATTACCAAAATTCAAAAAAGGAGTTTAAGAACTTCAAAGAGAATCTTGAATCGTACTTTGGCTCGTGA 1305 0.4337 MASLLMHSDRLLHLFIQKRTTVGELTLQKVFTMRPEFFLLACVVLFSSLVGCDASVLLNSTAGNSAEKDAIPNLTLRGFDAINDIKATVEAQCPGVVSCADILALSARDSVSIPFKEPLWEVLTGRRDGRVSLSTEALANIPAPFFNFTQLKQNFASKNLTEHDLVVLSGSHTIGISHCNSFSTRLYNFTGNGDQDPSLDPTYAAFLKTKCTSLSDSTTTVEMDPNNSTSFDSNYYSNLLQNKGLFQSDVALLTTKGSRNIVNELVDLETFLTEFAQSMKRMGNVEVLAGTSGEIRSKCWAITTSQRLYLYLSWDNWSNNTVKLWKFDAILGKLLVHQIQVIKVHGKLIPHSVKNWVERYEEDPKPALVELLIMLFEACRAKYHHRGDLLDETDVDDVVVALVNCAKRGEVEDYQNSKKEFKNFKENLESYFGS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3269 434 PRINTS Haem peroxidase superfamily signature 97 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Haem peroxidase superfamily signature 116 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 CDD secretory_peroxidase 51 302 IPR033905 GO:0004601|GO:0042744
Glsi02g3269 434 ProSitePatterns Peroxidases proximal heme-ligand signature. 164 174 IPR019793 -
Glsi02g3269 434 PANTHER PEROXIDASE 25-RELATED 50 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 FunFam Peroxidase 50 155 - -
Glsi02g3269 434 Gene3D Peroxidase, domain 2 142 282 - -
Glsi02g3269 434 FunFam Peroxidase 142 282 - -
Glsi02g3269 434 Pfam Peroxidase 42 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 Gene3D - 50 301 - -
Glsi02g3269 434 SUPERFAMILY Heme-dependent peroxidases 50 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 38 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 238 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 116 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 77 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 96 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 277 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 PRINTS Plant peroxidase signature 163 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3269 434 ProSiteProfiles Plant heme peroxidase family profile. 51 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3269 Glsi-ChrGlsi02 80711887 80714576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3269 51 299 Peroxidase AT1G05260 55.159 4.06e-92 280