Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3268 ATGGCCTCGCTGCTAATGCATTGCGATAGACTTCTGCATTTGTTCATTCAAAAACGAACTACAGTAGGGGAAGTGACATTGCAAAAGGTTTTCACCATGAGGCCAGAATTCTTCTTGTTAGCTTGTGTGGTTCTTTTTAGTTCTCTTGCGGTTGGTCAAGGAGGCGACCTTAGGAAGAAATTCTACCGAGTTTCCTGTCCAAAGGCTGAGGAGATAATTAAGACAAGAACCACGCAGCTTGTCTCTGCAAACCCTGGTTTGCCAGCGAAGTTGCTGAGAATGCATTTTCATGACTGTTTTGTTAGGGGTTGTGATGCCTCAGTTTTGCTGAACTCCACCGCCGGCAATTCTGCTGAGAAGGATGCAATTCCTAATCTAACTCTGGGAGGCTTTGATGCCATTGATGACATCAAAGCAACAGTCGAGGCCCAATGTCCAGGAGTTGTATCCTGTGCTGACATACTGGCATTGTCTGCTAGGGACTCTGTTTCCATCCCCTTTAAGGAACCTCTATGGGAAGTGCTTACTGGTAGAAGAGATGGCAGAGTGTCTTTAAGCACAGAGGCCTTGGTGAACATTCCAGCTCCTTTCTTCAACTTCTCCCAACTCAAACAAAACTTCGCCGGCAAAAATCTTACTGTGCATGATCTGGTTGTGTTATCAGGCTCACACACAATCGGAATAGCCCATTGCAACTCCTTCAGCACCAGGCTGTACAACTTCAAAGGCAAGGGCGATCAAGACCCTTCTTTGGACCCCACCTATGCTGCGTTCTTAAAGACAAAATGCACAAGCCTCAGTGACAATACCACAACAGTGGAGATGGATCCCAACAGCTCTACCTCATTTGACAGTAACTACTACTCTAACCTTCTTCAGAACAAGGGGCTGTTCCAATCAGATGCTGCACTTCTAACAACCAAGGGTTCAAGAAATATTGTCAACGAATTGGTTGACCTAGAACCTTTCTTAACAGAGTTTGCTCAGTCAATGAAGAGAATGGGAAACATTGAGGTGCTTGCGGGCACGAGTGGGGAAATTAGGAGCAAATGTTGGGCTGTCAACTCTTAA 1071 0.4575 MASLLMHCDRLLHLFIQKRTTVGEVTLQKVFTMRPEFFLLACVVLFSSLAVGQGGDLRKKFYRVSCPKAEEIIKTRTTQLVSANPGLPAKLLRMHFHDCFVRGCDASVLLNSTAGNSAEKDAIPNLTLGGFDAIDDIKATVEAQCPGVVSCADILALSARDSVSIPFKEPLWEVLTGRRDGRVSLSTEALVNIPAPFFNFSQLKQNFAGKNLTVHDLVVLSGSHTIGIAHCNSFSTRLYNFKGKGDQDPSLDPTYAAFLKTKCTSLSDNTTTVEMDPNSSTSFDSNYYSNLLQNKGLFQSDAALLTTKGSRNIVNELVDLEPFLTEFAQSMKRMGNIEVLAGTSGEIRSKCWAVNS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3268 356 PANTHER PEROXIDASE 25-RELATED 44 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 274 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 215 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 329 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 290 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Plant peroxidase signature 168 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Haem peroxidase superfamily signature 276 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Haem peroxidase superfamily signature 168 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 FunFam Peroxidase 194 334 - -
Glsi02g3268 356 FunFam Peroxidase 60 197 - -
Glsi02g3268 356 Gene3D - 60 355 - -
Glsi02g3268 356 Pfam Peroxidase 76 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 216 226 IPR019793 -
Glsi02g3268 356 ProSiteProfiles Plant heme peroxidase family profile. 56 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 Gene3D Peroxidase, domain 2 194 334 - -
Glsi02g3268 356 SUPERFAMILY Heme-dependent peroxidases 57 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi02g3268 356 CDD secretory_peroxidase 57 354 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3268 Glsi-ChrGlsi02 80700445 80701723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3268 57 356 Peroxidase AT1G05260 54.455 2.97e-114 333