Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3258 ATGCCGTCACGCGCTACCCGGCAGTGGACAAAGCACGTGTCATCGTCAATGGCACTTGGAGGGCATTATGGGGAATTCACAAAGAGGATTGTTGTCTCTTCTTCTCGAGTAACCTTAATCCGGGCGCTTTCTCTGGTTTCGGTTCGAACCTTTGCTGTGGAGATAGAGAGCAAAAGACACATGGCTGGTAGTAATGAAGTCAACCTCAATGAATCTAAGTGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTGGCCTACAATCTCCTTCGACGTGCAGATGGAACATTCAACCGTGAGTTGGCTGAGTTCCTAGATCGGAAGGTCCCCGCCAACACAATTCCGGTTGATGGGGTATTCTCTTTTGACCATGTTGATCGAAACACTGGCCTCTTCAATCGGGTTTATCAACCATCTCCTGAAAACGAGGCTAAGTGGGGCAGTATAGAGCTTGAAAAGCCCTTGAGCACCATCAAGATTGTCCCTGTCATAATCTTCTTCCATGGTGGAAGTTTTTCCCATTCCTCTGCTAATAGTGCTATTTATGACACTCTCTGCCGCCGCCTTGTGAACATTTGTAAGGCTGTTGTAGTCTCTGTAAACTACCGCCGATCTCCTGAGCATCGATATCCATGTGCATATGATGATGGCTGGGCTGCACTCAAGTGGGTTAAATCAAGAACGTGGCTTCAGAGTGGAAAGGATTCAAAGGTTCATGTATACATGGCTGGGGATAGTTCTGGCGGCAATATTGCTCATCATGTGGCGGTGAGGGCAGCTGAGGAAGATATTGAAGTATTGGGTAATATTCTTCTTCATCCATTGTTTGGTGGGCAGAAGCGAACAGAGTCGGAGAAGAAACTGGATGGAAAGTACTTTGTGAGATTGCAAGACAGAGATTGGTATTGGAGAGCTTTTCTCCCTGAAGGGGAAGATAGAGACCACCCAGCTTGTAACCCTTTTGGCCCCAGGGGGAAAAGCCTTGCAGGACTCAAATTCCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTGTCCAAGAATGGCAATTGGCATATGTGGAAGGGCTCAAGAATTCTGGCCATGATGTGAGACTTCTTTACCTGAAAGAGGCCACAATTGGTTTCTACTTCTTGCCGAATAATGATCATTTCTACTGCCTCATGGAGGAGATAAACCACTTCAATTGTGTAGCATTACTTCTTACCCGTCATAACATCTATGGTGGTCAATTTGAGAGTTCTGAAACTCCGGGGATTGCTGCCTGTTCTCTTTCCATGTTTCGTCTTCATGTCACTACTAAGCTTGTGGGTAAGCATGAGGGCGAGTCATCTGTGGAGCCTGAGAATCATCACCGACAGTCCAGAAGTTTAAGTTGTGCATGA 1398 0.4628 MPSRATRQWTKHVSSSMALGGHYGEFTKRIVVSSSRVTLIRALSLVSVRTFAVEIESKRHMAGSNEVNLNESKCVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQPSPENEAKWGSIELEKPLSTIKIVPVIIFFHGGSFSHSSANSAIYDTLCRRLVNICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVHVYMAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGQKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLAGLKFPKSLVCVAGLDLVQEWQLAYVEGLKNSGHDVRLLYLKEATIGFYFLPNNDHFYCLMEEINHFNCVALLLTRHNIYGGQFESSETPGIAACSLSMFRLHVTTKLVGKHEGESSVEPENHHRQSRSLSCA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3258 465 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 244 256 IPR033140 -
Glsi02g3258 465 PANTHER ARYLACETAMIDE DEACETYLASE 98 376 - -
Glsi02g3258 465 SUPERFAMILY alpha/beta-Hydrolases 165 390 IPR029058 -
Glsi02g3258 465 MobiDBLite consensus disorder prediction 444 465 - -
Glsi02g3258 465 FunFam Gibberellin receptor GID1 61 402 - -
Glsi02g3258 465 Gene3D alpha/beta hydrolase 56 400 IPR029058 -
Glsi02g3258 465 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 168 184 IPR002168 GO:0016787
Glsi02g3258 465 Pfam alpha/beta hydrolase fold 168 381 IPR013094 GO:0016787
Glsi02g3258 465 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3258 Glsi-ChrGlsi02 80647289 80650890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3258 61 399 Carbohydrate Esterase AT3G63010 78.529 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3258 02 80647289 80650890 Glsi11g1227 11 7678826 7681270 CCT
Glsi02g3258 02 80647289 80650890 Glsi02g3258 02 80647289 80650890 ECH