Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g3163 | ATGAGAGGGGCTCTGAGATATCGCACGCGATTTGGTAAGCAGGATCAAGACGAGGTTTCTCGAAATAGAGTTGTTCAGAAGAAAGGGGATGATTTGCATGATGAGGTTTTGGCGCATGAAAAAGAAGCGTTAAACTTGACAATTGAGAATGAGGAAGTGAAGCCAATCTTTCAACAAGCATGTGACTTAGATTGGGATATGGGTAAGAGTGAAACTGTTGGCTTAGCTGAGAATAGGAGCAAAATGAGTAGTTTAAGCTGTGGCGATTGCATTGAAGGATTTGACATTGAGAAGGAGGTCAAGAAGAGAGATGATTCAAATGATAAAGTGCAGTTTGGTGGTCGAGTTTTGCGCTCAAGGTCAAAGAGAGATGACAATAAGATATCCAATAATGGAGAAATCGATGGTATGTTGAGTGGGAAAAGTAGAGAGCACGAACACGATCAGTTTGAGAGGAGAGAGTTAAGCGAAGAAAAGGGACAAGTTGATGAATTTGTTAGTAATAGTTATGAGAAGGAAGGGGTTCAGGTGAAAATGGAAGGCAATGACATAAGGAAGTTGAAACGGAAGCGTGGGAGGCCCCCCAAAATGAAGATGAAAGAGCAAGATCAATTAGTTGGTGATATTTGTCAGAGGGAAGGGGTTCAGGTGCAAAAGGAAGGCAATATCGTAAGGGAGTTGAAACGGAAGCGAGGGAGGCCCCCCATAACGAAGATGAAAGAGCAAGGCCAATCAGTTAGTCAAAAAATGCAACGCAAGCGTGGAAGGCCCCCCATGGCCAAGGCTGGGCAAAATTATAACCTTCTGAAAGAAGCACATAATGGAAAAGGAAGGGTGGGCTTTCGAAAAGGTAAGAAAGGTTTAACTATGAGAGATGGTACAAATATGGATGCAATTGATGATATATGCCCAAAAAGGAGATCTTCCGTGAGATGTTCTCTTGTAAAGAAGAGTGAATCTGTGAAATTGAGATCAAATTCTGTGGATACTCTTGTTGCTGAGAAAAGTCGAAAGAGTAAAGAGAAAAGTCGAAAGAGTAAAGAGAAAAGTCAAAAGAGTAAGGAGAAGCAGTTAGTGAGGGAAAACATTATGAAATTACTCTTGGCTGCAGGCTGGGAAGTTGAATATAGACCTAGGAATGGCAAAGTGTATAATGATGCAGTGTATGTTAGTCTAGATAGAAAGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAAAAGCATTCTGAAGCTGGTGATGGTGAAGGTAAGGTATACAGGCCAGGTTTCAAATTTACACCAATATCAGAGGAGGAATTCAAGATACTAACTAAGGTAATGAAGAAGAAAAGGAAAAGTAAGGAGAAATTGAAGCAAAAAGGAGGAAGAGGTGGAAATGCAGTTGATGGAGTCAATAAAAAAGTGAAGACAGAAAAACTAGGTTCTGTTGCAGGCTTCAGTAAGTCAATGAAGGGGAAAACGAAAAGGAAATGGTCGCTTGTTCGGGAGGACAATCCAGAATTTACATCACATAAAAGGTTTTCAGTTCTGGTCAAAGATCATAAGCGACCAAAAACACAAGACAAGAAGCGTTGTGCTTTGATGGTTCGCAATGCTGAGAAGGAGATAGATTCAGAAATTGATGGATATGTACCTTACAACGGAAAGCGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAGTCCTGCAAAATGGCAAAATTCATTATATGAACCACAAAAGGACAGGTGTAACACTGGAGGGTAGGATCACAGGAGATGGAATTCATTGTGACTGCTGTAATAAAATTGTTACAATTTTAGAATTTGAAGCCCATGCAGGAAGCAGCCTCTCTGATCCACTTAAAAATATTTATACAGAGGGAGGAGCTTCCCTTTTGCAATGCCTGCTAGACTCATGGAATAAACAAGATGAATATGAGCGTAAAGGTTTTAATTCCATTGATACTACAGGTAAAGACCCTAATGATGATACATGTGGTGTCTGTGGAGATGGTGGAGACCTGATCTGTTGTGATGGTTGCCCATCAACATTCCATCAAAGCTGCCTGGATATTAGAAAGTTCCCATCTGGTGACTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGGTTGGCTGGTGGAAGTACAAACCAAAGGGATGGCCATGATGATTTTACTGCATCTGCATTACTTACATGCCGTTTATGCGAGCAAAAATATCACAGATCCTGCATTGAGGTAAACGGTTCCAAGACTGATGACTCCAGTGATGCATTCTATTGTGGAAGCAGATGTCAGGAGTTATCTGAGAGACTTGAAATGCTTATTGGGGTTAAACATGATATTGAAGATGGATTTTCTTGGACTTTTATTCGCCGGTCAGGTGTTGGCTCTGATGCTTCCCAGATACAATCTCAAATGGTTGAATGTAATTCCAAGCTAGCTGTTGCATTATCAGTAATGGATGAGTGCTTCATGCCTTATATTGATCATAGAAGTGGGATTAATCTAATCCACGGTATTCTTTATAATTGTGGGTCAAACTTCAGACGCCTGAACTATAGTGGTTTTATTACTGCAATTCTTGCGAGAGGTGATGAGATTGTCTCTGCCGCATCTATTAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCCGCTATATGTATAGGCGGCAAGGAATGTGCCGTCGGCTTCTAAGTGCCATTGAATTGGCACTCAGCTCTCTTAACATTGAGTTATTGGTCATACCAGCAATTTCAGAACTTAGGGAAACTTGGACTTCTGTTTTTGGGTTTGAGCCACTCGAGGTGGCAAGGAAGCAAATAATAAAGAACATCAATCTGTTGGTATTCCCTCATGTAGATATGTTACAAAAAAAAATAGTGAAGCCTAAAGCTGTTGATGAAAATCTTATTCCTACAGAAGTTTCCAATCCTCAACTGCAGAAGAATCAGACTACACATGAGGAAGCAACTAATTGTGATGAAGTCGGTTCATTTGGATCTGATTTGATCACTTCCGCCAGGAGTGTGATCCCTGCCTTGAATATATGCCAGATAAATGATAAACCTGTGTCTATTAAATCTGGTTCTCAGGTTCCTGATGGTTTATCTAACAACACACATGACAGTATTAGTAAGACTACAAATCACAATACATGTCCAAATGATGTAAAATTTCAAGCTGTATGTCATGCAATCAATGATAATTTGATAGTAAAAGACAAAACTACTGTAAATGCACATGATTACGTGAGTGTTGTTCATCGCCAAGATGAAGAGATAAATATGAGTCGGAATACTGGATCTGGTTGCATCATACTGGCACATGATGAAAAGACAGTAGGTTTAGATAACCAATTGAAAAATTGTTGTGTCTCTGAGGAGGAAAGGCAAAATCTCAGAGTGTCTCATATCAACTCCAAAGCTACTGAAGGAGAAGGACGTTATGTTGGTGCTTCCTCAGAGGGTACTGATACTATTCCCGTTGGAGAAGTAGCAGCGGATGACATGGTTACAAGTAACAACAGTGCTGAGGACTGTCCACACTTGGCAGAAAGTATTCCTCCTAAATCCCATAATGCATTTTGTACAAGGGAATTAAAATGTTCTGCTGACATTCTCTGCCATGATTCAAAGAGTTCAATTCCATCTGCACTTGATACAGGAACTAGTACTGTGCACTGTGGTTCTCAGAAGTTGCAGGTTGGAGAATGTGCTTCTGGTTCACTTAAGAATCTTGACAGTGTTGAACTGAGAAGCAATCTTGAGTGTGTTCAGCCTTATTCCATTGGATCAAAAGAAGTGAATTCTGAATCTATCTATGGTTGTGGTTCTCAGTGTAGACCCGATGATGAATGTGTCCCTAGTGAAGTGGTTATTCCAACTTGCTTCTTGACACACCTTAGAGATTGCCAATACCTAGAGGTAGCTTCAGGTTCTTGTGAGGAGATTGCAAATGGTGCCAATGAGAGGAGTGAAGCAACCAGTGCAGCTGAGTCCAATTCCCTTCCAGCTGATAGGAATTTAGATCTTAATGATAATCCATGGATGAAGCAGTCTTCAGAGCTGACTGAGCTTGATTTACAGGTTGATCAAACTTCAAGGAGTAATGCTCCATCTTTGTGTAGCCCAACCACCGCTTCTGGCGTGGCTCTTCACTGTACATCCGCTAGTGGTACTTCATGTAGTAATACTGAAGCAATAGTTCTGTCAAACCAAGCCAGTTGA | 4233 | 0.4092 | MRGALRYRTRFGKQDQDEVSRNRVVQKKGDDLHDEVLAHEKEALNLTIENEEVKPIFQQACDLDWDMGKSETVGLAENRSKMSSLSCGDCIEGFDIEKEVKKRDDSNDKVQFGGRVLRSRSKRDDNKISNNGEIDGMLSGKSREHEHDQFERRELSEEKGQVDEFVSNSYEKEGVQVKMEGNDIRKLKRKRGRPPKMKMKEQDQLVGDICQREGVQVQKEGNIVRELKRKRGRPPITKMKEQGQSVSQKMQRKRGRPPMAKAGQNYNLLKEAHNGKGRVGFRKGKKGLTMRDGTNMDAIDDICPKRRSSVRCSLVKKSESVKLRSNSVDTLVAEKSRKSKEKSRKSKEKSQKSKEKQLVRENIMKLLLAAGWEVEYRPRNGKVYNDAVYVSLDRKTHWSITLAYKRLQKHSEAGDGEGKVYRPGFKFTPISEEEFKILTKVMKKKRKSKEKLKQKGGRGGNAVDGVNKKVKTEKLGSVAGFSKSMKGKTKRKWSLVREDNPEFTSHKRFSVLVKDHKRPKTQDKKRCALMVRNAEKEIDSEIDGYVPYNGKRTVLAWMIDLGTVLQNGKIHYMNHKRTGVTLEGRITGDGIHCDCCNKIVTILEFEAHAGSSLSDPLKNIYTEGGASLLQCLLDSWNKQDEYERKGFNSIDTTGKDPNDDTCGVCGDGGDLICCDGCPSTFHQSCLDIRKFPSGDWHCIYCCCKFCGLAGGSTNQRDGHDDFTASALLTCRLCEQKYHRSCIEVNGSKTDDSSDAFYCGSRCQELSERLEMLIGVKHDIEDGFSWTFIRRSGVGSDASQIQSQMVECNSKLAVALSVMDECFMPYIDHRSGINLIHGILYNCGSNFRRLNYSGFITAILARGDEIVSAASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLSAIELALSSLNIELLVIPAISELRETWTSVFGFEPLEVARKQIIKNINLLVFPHVDMLQKKIVKPKAVDENLIPTEVSNPQLQKNQTTHEEATNCDEVGSFGSDLITSARSVIPALNICQINDKPVSIKSGSQVPDGLSNNTHDSISKTTNHNTCPNDVKFQAVCHAINDNLIVKDKTTVNAHDYVSVVHRQDEEINMSRNTGSGCIILAHDEKTVGLDNQLKNCCVSEEERQNLRVSHINSKATEGEGRYVGASSEGTDTIPVGEVAADDMVTSNNSAEDCPHLAESIPPKSHNAFCTRELKCSADILCHDSKSSIPSALDTGTSTVHCGSQKLQVGECASGSLKNLDSVELRSNLECVQPYSIGSKEVNSESIYGCGSQCRPDDECVPSEVVIPTCFLTHLRDCQYLEVASGSCEEIANGANERSEATSAAESNSLPADRNLDLNDNPWMKQSSELTELDLQVDQTSRSNAPSLCSPTTASGVALHCTSASGTSCSNTEAIVLSNQAS | 1410 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g3163 | 1410 | Pfam | Tify domain binding domain | 584 | 633 | IPR032308 | - | |
Glsi02g3163 | 1410 | ProSiteProfiles | Zinc finger PHD-type profile. | 659 | 704 | IPR019787 | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 1330 | 1350 | - | - | |
Glsi02g3163 | 1410 | SMART | PHD_3 | 703 | 763 | IPR001965 | - | |
Glsi02g3163 | 1410 | SMART | PHD_3 | 661 | 702 | IPR001965 | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 138 | 159 | - | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 329 | 356 | - | - | |
Glsi02g3163 | 1410 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 649 | 717 | IPR013083 | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 331 | 356 | - | - | |
Glsi02g3163 | 1410 | SUPERFAMILY | FYVE/PHD zinc finger | 654 | 707 | IPR011011 | - | |
Glsi02g3163 | 1410 | PRINTS | AT-hook-like domain signature | 226 | 237 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | PRINTS | AT-hook-like domain signature | 188 | 198 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | PRINTS | AT-hook-like domain signature | 249 | 259 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | PANTHER | PHD FINGER PROTEIN 12 | 319 | 1052 | IPR042163 | GO:0003714|GO:0045892 | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 105 | 130 | - | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 229 | 261 | - | - | |
Glsi02g3163 | 1410 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 802 | 962 | IPR000182 | GO:0016747 | |
Glsi02g3163 | 1410 | SMART | AT_hook_2 | 188 | 200 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | SMART | AT_hook_2 | 251 | 263 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | SMART | AT_hook_2 | 228 | 240 | IPR017956 | GO:0003677 | |
Glsi02g3163 | 1410 | CDD | PHD1_AIRE | 662 | 701 | - | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 446 | 465 | - | - | |
Glsi02g3163 | 1410 | MobiDBLite | consensus disorder prediction | 105 | 159 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g3163 | Glsi-ChrGlsi02 | 80023118 | 80033147 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g3163 | 186 | 969 | PHD Transcription Factor Family | AT5G36670 | 41.493 | 0.0 | 614 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi02g3163 | 02 | 80023118 | 80033147 | Glsi11g0640 | 11 | 4022101 | 4030892 | CCT | |
Glsi02g3163 | 02 | 80023118 | 80033147 | Glsi02g3163 | 02 | 80023118 | 80033147 | ECH |