Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3162 ATGCTCGTCACACTTGGAAGAAACCTCAACCTGTGTTTCTCAAAGATGATGATGCGGCCATTGTCACCCGAATCTCCACCTTCCACCCCCACTCCCTCGAACCCTCATAATCACAGCCCTCTTTTACCCACTGCCGCACCCTCTTCTATTTTCATCAAAAACTTCAATTCTCTCTATGACCCCACCTTCGATAACTCCTCCTCTTCTTCTCTCTCCTCCTTCGAACCCGACTTCGCCACCGCCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCTGGCCGCTCCAACTCTATCGTTGACTGCACGCCGTCGTCGTCGTCTTCCTTGGCCCATAACGAGAAGAAGCTCTTCAACAACAGCGTGGCCGTCCCGACGTACTCGCCGGACCCTTATTTGGACTTCCGACGCTCCATGCAGGAGATGGTGGAGGCGCGTCCTGAGCTAATGGACGTCAAGTCCCATTGGGAAATCTTGCACGAGCTTCTCCTCTGCTATCTCGCGCTCAATCCCAAGAGCACCCACAAGTACATTGTTAGCGCTTTTGCCGATCTTCTCGTCAGCCTCATGCCGCCGACCGACGACCTCGCCGCCACCGGTTGA 600 0.5517 MLVTLGRNLNLCFSKMMMRPLSPESPPSTPTPSNPHNHSPLLPTAAPSSIFIKNFNSLYDPTFDNSSSSSLSSFEPDFATAFASQRFFFSSPGRSNSIVDCTPSSSSSLAHNEKKLFNNSVAVPTYSPDPYLDFRRSMQEMVEARPELMDVKSHWEILHELLLCYLALNPKSTHKYIVSAFADLLVSLMPPTDDLAATG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3162 199 MobiDBLite consensus disorder prediction 20 40 - -
Glsi02g3162 199 Pfam Transcriptional repressor, ovate 127 188 IPR006458 -
Glsi02g3162 199 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 188 IPR038933 GO:0045892
Glsi02g3162 199 NCBIfam uncharacterized plant-specific domain TIGR01568 121 189 IPR006458 -
Glsi02g3162 199 ProSiteProfiles OVATE domain profile. 123 187 IPR006458 -
Glsi02g3162 199 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3162 Glsi-ChrGlsi02 80014510 80015109 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi02g3162 Ovate 1.3e-24 No_clan