Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3142 ATGGGCCCTGGGAGACCATCAGCGAGAAATTCCACCGGAGAAAGTGGTGGGCCCGAAACCCAGTTAGATCGGAGTGGCCTGATGGGCCAGTGCTCACAATTAATCTTTAAGTTTAGAGGATGTTGGCATGGGCTAAACAGTGGATACAAAACTGGAACAGAGAGAGACAGTAAAATGGGTAACGCTGACTATGTGTACCCGTCGGCCACGAACCTGCAGGAGAGTGGTCACCGCGTGGCCATTCCACCGCCTCAACCATTTTTCAAGTCTCTCAAGTACTCTCTCAAGGAGACCTTCTTTCCAGATGACCCTTTGAGGCAATTCAAAAACCACCCACCTTCTAGAAGGTTCTTGCTTGGCCTTCAGTACGTCTTCCCAGTCTTTGAATGGGCACCTCGCTACACTCTCCATTTCTTCAAATCAGACCTCATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCCCAAGGCATCAGTTACGCCAAGCTGGCCAACCTCCCACCAATTCTTGGACTTTATTCGAGCTTCATACCACCATTGATTTATGCCATGATGGGAAGCTCCAGGGATTTGGCGGTGGGAACAGTGGCGGTTGGATCGCTTCTACTGGGTTCTATGCTGGCCGGTTCAGTTAATCCCAAGGAGAACCCGAAGCTCTTTCTGCACCTTGCTTTCACTGCTACATTCTTTGCTGGTGTTTTGCAGGCTTCATTGGGTTTATTTAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGCCTGCAACAGCTGAAATCGATTCTGGGACTGGAGCATTTCACCCATGATGCTGATCTCGTGTCAGTAATGCGCTCCGTTTTCAGCCAAACACACGAGTGGAGGTGGGAAAGCGCTGTGTTAGGGTGTTGCTTCATTTTCTTCTTGCTCATCACCCGATACTTCAGCAAACGACAACCAAAATTCTTTTGGGTGTCGGCAATGGCACCATTGACGTCCGTTATCTTGGGAAGTCTGCTCGTTTATCTCACCCACGCCGAGAAGCACGGCGTTCAAGTGATAGGAGAGTTAACGAGGGGGTTAAATCCACCTTCCTTTAAAGATATGGTATTTGTGGCGCCTTATATGAGCACGGCTATTAAAGCTGGCTTTGTCACCGGCATCATAGCCCTCGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGCACCATGAACATAGTCGGTTCCCTCACCTCCTGCTACCTCACAAGTGGACCATTTTCGCGATCGGCGGTGAACTACAATGCCGGATGCAAGACTGCAGCATCGAATGTTGTAATGGCAATGGCGGTGATGCTGACATTGTTATTCCTGACACCCTTGTTCTATTACACTCCCTTGGTGGTGCTATCAGCCATCATTGTATCAGCAATGCTGGGCCTCATAGATTACCAAGAAGCCATCCATCTTTGGAAGGTTGACAAATTCGATTTTGTAGTGTGCATGAGTGCATATATCGGCGTGGTCTTTGGCAGTGTCCAAATTGGCCTTGTCATAGCCGTATTGATATCTGTGCTTAGGGTACTATTGTTTGTTGCAAGGCCAAGAACGTTTGTTTTGGGGAACATTCCAAACTCTGTTGTGTACAGAAATGTTGAACAATATCCAAATGCGAATCATGTTCCAGGAATCCTGATTCTTGAGATTGATGCACCCATTTACTTTGCCAATGCAAACTATTTAAGAGAGAGGATCACAAGATGGATTGATGAAGAGGAAGACAGGATTAAAGATTCAGGGGAAACCAGCTTGCAATGTGTTATAATGGATATGACTGCTGTTGGGAACATTGATACAAGTGGAATAAGCCTACTCGAGGAGGTCAAGAAGATTGCAGATAGAAGAGGGCTGCAACTCGTTTTGGTCAATCCCGGAAGCGAGGTGATGAAAAAGCTCAACAAATCCAAGTTCCTAGAGGATATAGGCCATAAATGGATCTATCTGACGGTTGAAGAGGCTGTTAGAGCATGCGACTACATGCTTCGTACATGCAAACCGAACCCCAGGAAAGATGAATCAGAAGTTTGGAACAATGTCTGA 2148 0.4688 MGPGRPSARNSTGESGGPETQLDRSGLMGQCSQLIFKFRGCWHGLNSGYKTGTERDSKMGNADYVYPSATNLQESGHRVAIPPPQPFFKSLKYSLKETFFPDDPLRQFKNHPPSRRFLLGLQYVFPVFEWAPRYTLHFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLAGSVNPKENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHDADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLITRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGELTRGLNPPSFKDMVFVAPYMSTAIKAGFVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSLTSCYLTSGPFSRSAVNYNAGCKTAASNVVMAMAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQEAIHLWKVDKFDFVVCMSAYIGVVFGSVQIGLVIAVLISVLRVLLFVARPRTFVLGNIPNSVVYRNVEQYPNANHVPGILILEIDAPIYFANANYLRERITRWIDEEEDRIKDSGETSLQCVIMDMTAVGNIDTSGISLLEEVKKIADRRGLQLVLVNPGSEVMKKLNKSKFLEDIGHKWIYLTVEEAVRACDYMLRTCKPNPRKDESEVWNNV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3142 715 PANTHER SULFATE TRANSPORTER 88 693 IPR001902 GO:0016020|GO:0055085
Glsi02g3142 715 CDD STAS_SulP_like_sulfate_transporter 571 686 - -
Glsi02g3142 715 Pfam Sulfate permease family 139 519 IPR011547 GO:0016020
Glsi02g3142 715 NCBIfam sulfate permease 126 689 IPR001902 GO:0016020|GO:0055085
Glsi02g3142 715 Pfam STAS domain 571 689 IPR002645 -
Glsi02g3142 715 ProSiteProfiles STAS domain profile. 570 693 IPR002645 -
Glsi02g3142 715 SUPERFAMILY SpoIIaa-like 572 693 IPR036513 -
Glsi02g3142 715 ProSitePatterns SLC26A transporters signature. 168 189 IPR018045 GO:0008271|GO:0008272
Glsi02g3142 715 Gene3D STAS domain 550 695 IPR036513 -
Glsi02g3142 715 MobiDBLite consensus disorder prediction 1 24 - -
Glsi02g3142 715 FunFam Sulfate transporter 31 550 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3142 Glsi-ChrGlsi02 79915220 79922869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3142 77 715 Inorganic Solute Cotransporters AT4G02700 67.500 0.0 893