Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3122 ATGATTTCCACAATCCAAGAATCCTCCCGTCTTCCTCGCTTCCCACTTCGTACCCTTCTTCCAACCCAGGACAGGATTTCCAGTAGCCGAGCAGAGCTGTTGCTCCCATTCACAAAGCATCTTCTGAATGTCTCAATTGATGGGGACCCTGTGGAAAAAATTGTTATTGAGCTTTTTGCCAGTATTGTTCCTAAGACAGCTGAGAATTTTCGGGCACTCTGTACAGGTGAGAAAGGTATTGGAAAATCAACCGGAAAACCTTTGCATTATAAAGGAACTTGTTTTCATCGTATAATTAAAGGTTTTATGGCCCAAGGTGGTGATTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATTTACGGAGGAAAGTTTGCAGATGAAAATTTCATACTAAAGCATGATGGACCGGGTATTCTATCTATGGCTAATGGAGGTCCAAACACAAATGGCTCCCAGTTCTTTATTACCTTTAAGCGCCAACCCCATCTTGATGGGAAACATGTAGTTTTTGGAAAAGTTGTCAATGGAATGGATCTTTTGAAGAAAATTGAACAGGTGGGAACATCAGATGGGAAGCCTATGCGGCAAGTTAAAATTGTTGATTGTGGTGAAACCTCAGAAACAAAAATTCAGCCAACAATTGAGAAAGAGAAAGGTAAGAAGAGAAAATCAGGGAAATCCCCATCTTCTGATGACAGTTCTGACAAAAAATCAAGAGGAAGAAGTAAAAAATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCAACATCTGATTCATCTAGCTCTGATAGCTATAGTGATAGTGATTCTGATTCATCAGATTCTGAGTCAGAATCATCGCTTTCTGATTCAAGTTCCTCTAGCTATGGGAAACACCGAAGGAGAAAACCTGTGAAAAGAAATAGGCACAAACATGGGAAGAAGAGAAAGAATGGGCGAAAGCAGAGAAAGAGAAGCCAGCATAATAGAAGATCAAGACGCAAGTCCAGATGGAGTTCTGAGGATTCAAGTGATACAGAAAGTGATAGTACTAGTGGTAGTGGCAGTCGTTCTGATGACAAGAAAGATGATCGTAAAACATGTGATGACAATAAGGAAAAAAGAAATTTAGACACAGGAAAACACTCTTCCAGCCTTGCCTTAGTGAGACAAACTGTTCCAGATCAAGGGGAGGACTCCAAGGTTAGAAGAACTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGGATTTCTGAATAACGGACATGATACTGAAGCCAAATTCAGTAAACCTGCTAAGCAACCCGCCTATCCAAATCACAATAGAGGTGCAAGTCCTGGAAGAAGTGATCCGACTAGGAAGTTGGTTGAGCAAAACCAAGGAAGTGCTTTGTTGGCTAGTCCTCACCAAAAAGCCAGTGAGCCTGCTGTCTCCAAACATAGTCAGGATTTGTCAAAAAGCCATTCACCAAATGGCGTGCCAAAGCGTATTAGAAAAGGCCGTGGCTTTACAGAGCGCTATGCATTTGCTCGCAAATATCGTACTCCATCTCCAGAGCGGTCACCCCGTTCCTATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAATACAAGCTACAGAAGTTATTCTGAGCGCTCACCACAGAGACGTTATCGAAGCCCACCTGGGAGCAGGAACCGTCCGAGATACCAACGCAGAAGAAGCTGGAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCATTATGGGGACCAGGGCCGCAGCCAGAGTCCAAGACGTAGTCTCAGTCCAGAAGGCAGGCAGCCTCCAATAAGTGACAGGTTAAAATCCCGACTTGGTCCTCAAGGCAATCTACAGTCTTCTGACAGAAGGTCCAGGTCTCATTCCAGGAGCCATGAATCATCTCACTCTGGATCCCCCGATGCTGCACCACCAAAGCGTCGTGATAACAAGAGGACTTCTATATCTCCCAGCAGGTCTAGATCTAGTTCATTATCTGGACAGAAGGGATTAGTTTCCTATGGAGATGGCAGTCCTGATTCTGGGGCAAGGTAG 2067 0.4398 MISTIQESSRLPRFPLRTLLPTQDRISSSRAELLLPFTKHLLNVSIDGDPVEKIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGILSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDLLKKIEQVGTSDGKPMRQVKIVDCGETSETKIQPTIEKEKGKKRKSGKSPSSDDSSDKKSRGRSKKSSKDLRKRRRYSTSDSSSSDSYSDSDSDSSDSESESSLSDSSSSSYGKHRRRKPVKRNRHKHGKKRKNGRKQRKRSQHNRRSRRKSRWSSEDSSDTESDSTSGSGSRSDDKKDDRKTCDDNKEKRNLDTGKHSSSLALVRQTVPDQGEDSKVRRTEDKQSHEEGELSPENSGFLNNGHDTEAKFSKPAKQPAYPNHNRGASPGRSDPTRKLVEQNQGSALLASPHQKASEPAVSKHSQDLSKSHSPNGVPKRIRKGRGFTERYAFARKYRTPSPERSPRSYRYGDRNIRRNFDRNTSYRSYSERSPQRRYRSPPGSRNRPRYQRRRSWSRSISRSPVRGHYGDQGRSQSPRRSLSPEGRQPPISDRLKSRLGPQGNLQSSDRRSRSHSRSHESSHSGSPDAAPPKRRDNKRTSISPSRSRSSSLSGQKGLVSYGDGSPDSGAR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3122 688 MobiDBLite consensus disorder prediction 499 542 - -
Glsi02g3122 688 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 90 107 IPR020892 GO:0003755|GO:0006457
Glsi02g3122 688 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 165 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 73 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 107 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 MobiDBLite consensus disorder prediction 453 468 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 391 410 - -
Glsi02g3122 688 CDD cyclophilin_ABH_like 44 204 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 559 573 - -
Glsi02g3122 688 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 41 205 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 MobiDBLite consensus disorder prediction 211 243 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 543 557 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 293 329 - -
Glsi02g3122 688 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 37 213 - -
Glsi02g3122 688 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 204 IPR002130 GO:0000413|GO:0003755
Glsi02g3122 688 Gene3D - 36 206 IPR029000 -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 201 688 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 660 675 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 475 490 - -
Glsi02g3122 688 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 42 205 - -
Glsi02g3122 688 MobiDBLite consensus disorder prediction 349 375 - -
Glsi02g3122 688 SUPERFAMILY Cyclophilin-like 35 206 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3122 Glsi-ChrGlsi02 79659956 79668269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3122 56 202 U-box Gene Family AT5G67530 46.980 1.04e-32 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3122 02 79659956 79668269 Glsi02g3122 02 79659956 79668269 ECH