Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3111 ATGGGTGACGCTCATGAGGCCTACCTAAGCTTCTTATTGGATGGTGAAATCTTTAGCCCCTTGCTGATTTTCATGAATATCGAAGTGTTGAAAAGTTGTACCTGCTTTCCATCAGCGCAGTGGTTAATTAGTCTCTTTAAGAATGAATGGATAAATAAGAATAAGAAGAAGGCGATACCCCCCGAGGCTCAGAAGCTCATAGGAATCGTTGTCTTCAAGAAATGTCTTGGAGTTTCATACCTGGGAACTGTTGTTGACTACGACGTCAACAGAAAATGGTTCAGAATCGAGTATGACGATGAAGGGTCGGAAGACTTGGAGGAGAAAGATGTCGTCAAATATTTGGCCTCCACTACTCAAATCAATGAACACTTAAAACGGGCACGTAATTTGAGGAGGAGTGCTAAAAGGAAGCAGAAGAAGCGTGCTTCGGGAAAGGGATCAACTCCAAGAACCAGTCGCAAGAAAAACGATCCATCGTGCAGGAGAAATGATGGTACTTATATCCCTTTGGTCTACAGAGCCACCAAGAAAGATGACTACTATTGAGGCAATCTTGGTCTCACGAAACCTTTGCTCAAAAATCTCTTGATTCCGCCGCACTGTAACTGTAAAAGCGAATTAAGTGGACCTGAGATACAGTTAAGGGATGTTGGGCCCGTGTTACGAAACGAAACTGCCTATATGGCTCCGCCAAGCAGGAAATCCACGAGAGCTAGGAAGCCTTTGTATTGGATAAGGATTACCAGAGGATCTCAACTAGGAATATTTTGTAATGAGAGTTTTGGAGTTGCTCTCTACTCGAAAGAGGGAATTTCTGTCCTTCATTTCTGTGAGAGTTCTGATTTCCTGGTTCTTTCATTGTCCTCCATGGAAGCAAGAACGGATACCACTAAAATTGATGACCGATTCCATACGCTGGAGACTGAGATGGATGAGAGATTCGAAGATATGGAGACCAGAATTGCTAATGTCGAGTCTTCAGTCCTGCAGATTCAAAATATGTTACTGCTATTGTTGCAACAATCAGGGAGTCCTGTATCTCGATCACCTGGGTCATCTTTATACGGGGACTCCAACGACGCAGTGGTTGACGATGACGATAAGGACTCCAACGACGCCATGGTTGACGATGACGATAAGGGCTCCAACGACGCAGTGGTTGATGATGACAATAAGGACTCCCCCAAATTGTCTTCAGATTTGGAGGAAGCAGGAAGGCTAAAATTCGAATGCCTTTCAAATGACGGTATTGACGAGCATATGATTTGGCTGATAGGATTGAAGAATATTTTTGCTAGAGAAATACCCAGTATGCCCAAGCAGTATATTGTCCGACTTGTTATGGATGGGATCCACAAGTCTGTAATGGTTATAAGACGTAATCAAGTTGTTGGAGGTATCACATATCGCCCATATGTAAACCAGAAGTTTGGTGAGATAGCCTTTTGTGCTATAACTGCTGATGAGCAAGTGAAAGGTTATGGTACCAGACTGATGAATCACTTGAAACAGCACGCTCGGGATTCTGATGGGTTGACACATTTTCTTACATATGCTGACAATAATGCTGTTGGCTTTTTTATCAAACAGGGCTTTACAAAAGAGATTCATTTGGAGAAAGATCGATGGCAAGGGTATATTAAACATTATGATGGAGTTCTCATGGAGTACAAGATTGATCCCAATACATCAAGATTCTGA 1704 0.4266 MGDAHEAYLSFLLDGEIFSPLLIFMNIEVLKSCTCFPSAQWLISLFKNEWINKNKKKAIPPEAQKLIGIVVFKKCLGVSYLGTVVDYDVNRKWFRIEYDDEGSEDLEEKDVVKYLASTTQINEHLKRARNLRRSAKRKQKKRASGKGSTPRTSRKKNDPSCRRNDGTYIPLVYRATKKDDYYXGNLGLTKPLLKNLLIPPHCNCKSELSGPEIQLRDVGPVLRNETAYMAPPSRKSTRARKPLYWIRITRGSQLGIFCNESFGVALYSKEGISVLHFCESSDFLVLSLSSMEARTDTTKIDDRFHTLETEMDERFEDMETRIANVESSVLQIQNMLLLLLQQSGSPVSRSPGSSLYGDSNDAVVDDDDKDSNDAMVDDDDKGSNDAVVDDDNKDSPKLSSDLEEAGRLKFECLSNDGIDEHMIWLIGLKNIFAREIPSMPKQYIVRLVMDGIHKSVMVIRRNQVVGGITYRPYVNQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDSDGLTHFLTYADNNAVGFFIKQGFTKEIHLEKDRWQGYIKHYDGVLMEYKIDPNTSRF 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3111 567 MobiDBLite consensus disorder prediction 375 400 - -
Glsi02g3111 567 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 424 560 IPR016181 -
Glsi02g3111 567 Coils Coil 121 141 - -
Glsi02g3111 567 MobiDBLite consensus disorder prediction 349 400 - -
Glsi02g3111 567 Gene3D - 404 565 - -
Glsi02g3111 567 Pfam Acetyltransferase (GNAT) family 458 533 IPR000182 GO:0016747
Glsi02g3111 567 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 408 561 IPR000182 GO:0016747
Glsi02g3111 567 PANTHER GH11602P 392 564 IPR037800 GO:0004402
Glsi02g3111 567 MobiDBLite consensus disorder prediction 129 149 - -
Glsi02g3111 567 MobiDBLite consensus disorder prediction 126 165 - -
Glsi02g3111 567 CDD NAT_SF 455 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3111 Glsi-ChrGlsi02 79588221 79598913 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi02g3111 Acetyltransf_1 5.6e-09 CL0257