Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3109 ATGGCCAACAGAGTTCAAATTCCAGCAAGAAATTCAGCGCTTATAGCTATGATCGCAGATGAGGACACTGTTGTTGGATTTTTGCTGGCTGGAGTGGGCAATGTTGACTTGCGCCGGAAGACGAATTACCTTATTGTGGACTCAAAAACGACTGTCAAACAAATTGAAGATGCATTTAAAGACTTCACAACAAGGGAAGATATTGCAATTGTGCTGATCAGCCAATATGTTGCAAATATGATAAGGTTTTTAGTTGATAGCTACAACAAGCCTGTTCCTGCAATATTGGAGATTCCTTCCAAAGACCATCCTTATGATCCCACGCATGATTCAGTTCTTTCTCGAGTGAAGTACCTCTTCTCTGCTGAATCTGTAGCATCTGGGAGACGCTAA 393 0.4173 MANRVQIPARNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKDFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPTHDSVLSRVKYLFSAESVASGRR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3109 130 FunFam V-type proton ATPase subunit F 9 122 - -
Glsi02g3109 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Glsi02g3109 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Glsi02g3109 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - -
Glsi02g3109 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Glsi02g3109 130 NCBIfam V-type ATPase subunit F 9 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Glsi02g3109 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3109 Glsi-ChrGlsi02 79572757 79575168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3109 1 126 Primary Pumps ATPases(2) AT4G02620 88.095 6.86e-82 234