Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3092 ATGAGAAAGCAAATCACTATGAACACCAAGTCCATCAAGATAGAGGCTAGTATGGATGAGGTTGAAGAAGCTAACAGAGCAGCCGTTGAAAGCTGTCATAAAGTTATAAGTTTGTTGTCTCAGCCCCCCCAAGATCAGGTTCAGTATAGAAATTTAATGGTGGAAACTGGGGAGGCTGTGGTAAAGTTCAAGAAGGTTGTTTCTCTGCTCAGTAACAACATGGGTCACGCAAGAGTGAGGAAGCTCAAAAGACTTCAAATCCCTTTTCCCCAAACTATCCTCTTAGACAACCCAAATTGTAAAACAAACCATCAATCAAAAAATTTGCAGTTTCCGCAAATTAGCTTTCGGGAAGAGTCACTTCAGGAATTGGGCTCAAGCGTCAGAAATTCACTCTGCCTGGGAAACCCATCTTTGGAATTGAACTCAAATGGGAAAAGTCCTCTCCACCTTACCCAACAAGCGTCGTCACAGCACTATCACTTCCTTCAGCAACAGCAACAACAAAGGTTATTGTTACAGCAGCAACAGATGAAACACCAAGCGGAAATGATGTATCGGAGGAACAATAGTGGCATAAATCTAAATTTTGATAGCTCTAGCTGCACGCCCACGATGTCGTCAACTAGGTCCTTTATTTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACATGGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCAGATCAGAATTCACTACAACATAAAAGAAAATGCTCTGGCAGAGGAGATGAGGGCAGCGTCAAATGTGGGAGCAGTGCTAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAGCTTGCAGATATACCCCCTGACGATTATTCATGGAGGAAGTATGGGCAGAAGCCAATCAAGGGTTCTCCTCATCCTAGGGGATACTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCCATGCTAATGGTTACCTACGAAGGCGATCATAACCACCCTAAAATACCATCACAATCTGCAAATGCATGA 1089 0.4408 MRKQITMNTKSIKIEASMDEVEEANRAAVESCHKVISLLSQPPQDQVQYRNLMVETGEAVVKFKKVVSLLSNNMGHARVRKLKRLQIPFPQTILLDNPNCKTNHQSKNLQFPQISFREESLQELGSSVRNSLCLGNPSLELNSNGKSPLHLTQQASSQHYHFLQQQQQQRLLLQQQQMKHQAEMMYRRNNSGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPHSSDQNSLQHKRKCSGRGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLMVTYEGDHNHPKIPSQSANA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3092 362 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3092 362 FunFam WRKY transcription factor 65 278 355 - -
Glsi02g3092 362 MobiDBLite consensus disorder prediction 236 255 - -
Glsi02g3092 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 360 IPR044810 GO:0003700
Glsi02g3092 362 Pfam WRKY DNA -binding domain 296 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3092 362 Pfam Plant zinc cluster domain 247 292 IPR018872 -
Glsi02g3092 362 Coils Coil 163 183 - -
Glsi02g3092 362 Gene3D WRKY domain 279 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g3092 362 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3092 362 SUPERFAMILY WRKY DNA-binding domain 292 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3092 Glsi-ChrGlsi02 79467682 79472084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3092 18 359 WRKY Transcription Factor Family AT2G30590 56.806 6.54e-131 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g3092 WRKY 1e-25 CL0274