Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3091 ATGGGCGTTGACGCGCTTCAACTCAGAAGAGACTCTCTCTCCGGAGCTCCCTCCGACCCTCCTCCGCTTCCGTCCAACGCCGTGCGATTTGCCGGCCCCACGCCCAAGGACGCGCATTTCAGAGGCGTGCGCAAGCGTCCCTGGGGTCGATTCGCCGCTGAGATCCGCGATCCGTGGAAGAAGACGCGCAAATGGCTTGGAACCTTTGACACCGCTGAGGAGGCTGCCAAAGCCTACGACGAGGCTGCCAGGAGTCTCCGCGGACCAAGGGCTAAGACGAACTTCGTCTACGGTGCCGTCCCCGTGGCTCCGTTGATTCCGCTGCCACCGGCAATGGTGACTACCGCTGGTGGCGGTGACAGTAAAGACATGTTTGGGAGGCGCGTGGAGTTTTGGAGGCCTCCGATATATCACGCAGCGGATGTCCCGGCGGGGGTGCCGTTGAGATCGGAGTACAAGGGATACAAGTTAGAGAATGTGGATGTGATGGTGAGTGAGGAGAGGAAGATGCGGAAAGAGAAAAAGCCGTTCTTGTTCGACCTTAACCAGCCACCGCCACTATTCTGA 567 0.5944 MGVDALQLRRDSLSGAPSDPPPLPSNAVRFAGPTPKDAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAAKAYDEAARSLRGPRAKTNFVYGAVPVAPLIPLPPAMVTTAGGGDSKDMFGRRVEFWRPPIYHAADVPAGVPLRSEYKGYKLENVDVMVSEERKMRKEKKPFLFDLNQPPPLF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3091 188 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 32 127 - -
Glsi02g3091 188 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Glsi02g3091 188 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Glsi02g3091 188 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Glsi02g3091 188 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Glsi02g3091 188 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Glsi02g3091 188 MobiDBLite consensus disorder prediction 1 41 - -
Glsi02g3091 188 CDD AP2 38 95 IPR001471 GO:0003700|GO:0006355
Glsi02g3091 188 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Glsi02g3091 188 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Glsi02g3091 188 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3091 Glsi-ChrGlsi02 79464196 79464762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3091 36 127 AP2-EREBP Transcription Factor Family AT5G44210 60.870 6.71e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g3091 AP2 6.5e-14 CL0081