Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g3075 | ATGGGTTCCCTGAACGACGATGCCTTTGTGTCCTCGCCGGACATGGAAAAGTTCCTCTGTGAATTATTACTGGATTCCACACAGCCGATTTCTGAGCGCTTCAGAGCCCTCTTCTCTCTCCGCAATCTCAAAGGTCCCGGCCCTCGCAACGCTCTTATTCTCGCCACAAGGGATTCTTCAAATTTGTTGTCACATGAGGCTGCATTTGCCTTAGGTCAAATGCAGGATGTGGAAGCCATCCCTGCTTTGGTGTCAGTTCTGAACGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCAGAAGCACTTGGTGCTATTGGATCAGATAGTAATGTTGCTCTATTGAAGAATAGTTTGGAATCAGATCCAGCTCAGGAGGTTCGAGAAACATGTGAACTGGCTCTTAACCGTATTGAGCATTTGAAAGATGCCGGCAGTCATGATGAATTGCCTGCAACTGATGTATCACCTTATAAGTCTGTTGACCCAGCAGCACCATCTACCTCGTGTTCTTCTGTGGATCAGCTAAGGAAAGTACTTCTGGATGAAGGAAAAGGGATGTATGAGCGGTATGCAGCACTTTTTTCTCTTCGAAATGACAGTGGAAAGGAAGCTGTTGCCGCTATAATTGATTCTTTGGGTTCAAAAAGTGCTCTTCTGCGCCATGAGGTTGCTTATGTTTTGGGCCAATTACAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGTGATGTGAATGAGCACCCGATGGTTAGACATGAAGCTGCTGAAGCTCTTGGTTCGATTGCAGATGACCAAAGTGTAGCGCTTCTTGAGGAATTTGTGGCAGATCCGGAGCCTCTTGTCTCACAAAGTTGTCAAGTTGCTCTGAGTATGCTAGAATTTGAACAATCAGGGAAATCGTTTGAGTTCCTCTTCATGCGCACTCCTCTTGTCCAATAA | 951 | 0.4585 | MGSLNDDAFVSSPDMEKFLCELLLDSTQPISERFRALFSLRNLKGPGPRNALILATRDSSNLLSHEAAFALGQMQDVEAIPALVSVLNDLSLHPIVRHEAAEALGAIGSDSNVALLKNSLESDPAQEVRETCELALNRIEHLKDAGSHDELPATDVSPYKSVDPAAPSTSCSSVDQLRKVLLDEGKGMYERYAALFSLRNDSGKEAVAAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILSDVNEHPMVRHEAAEALGSIADDQSVALLEEFVADPEPLVSQSCQVALSMLEFEQSGKSFEFLFMRTPLVQ | 316 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g3075 | 316 | Gene3D | - | 2 | 150 | IPR011989 | - | |
| Glsi02g3075 | 316 | Gene3D | - | 161 | 305 | IPR011989 | - | |
| Glsi02g3075 | 316 | Pfam | PBS lyase HEAT-like repeat | 221 | 247 | IPR004155 | - | |
| Glsi02g3075 | 316 | Pfam | PBS lyase HEAT-like repeat | 254 | 280 | IPR004155 | - | |
| Glsi02g3075 | 316 | Coils | Coil | 125 | 145 | - | - | |
| Glsi02g3075 | 316 | Hamap | Deoxyhypusine hydroxylase [DOHH]. | 16 | 306 | IPR027517 | GO:0008612|GO:0019135 | |
| Glsi02g3075 | 316 | PANTHER | PBS LYASE HEAT-LIKE PROTEIN | 19 | 301 | - | - | |
| Glsi02g3075 | 316 | Pfam | HEAT repeats | 52 | 136 | - | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 30 | 59 | IPR004155 | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 219 | 248 | IPR004155 | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 188 | 217 | IPR004155 | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 252 | 281 | IPR004155 | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 61 | 90 | IPR004155 | - | |
| Glsi02g3075 | 316 | SMART | E-Z type HEAT repeats | 94 | 123 | IPR004155 | - | |
| Glsi02g3075 | 316 | FunFam | Deoxyhypusine hydroxylase | 7 | 157 | - | - | |
| Glsi02g3075 | 316 | SUPERFAMILY | ARM repeat | 94 | 295 | IPR016024 | - | |
| Glsi02g3075 | 316 | FunFam | Deoxyhypusine hydroxylase | 165 | 306 | - | - | |
| Glsi02g3075 | 316 | MobiDBLite | consensus disorder prediction | 147 | 168 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi02g3075 | Glsi-ChrGlsi02 | 79341461 | 79345891 | Dispersed/Wgd |