Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3073 ATGGCTTCTGCAACGTCTGGAAATGGCAGTGGGTCTGGGTCTGGGTCAGGTTCAGGGTCAGGATCTCCTTGCGGGGCATGCAAGTTCCTGAGACGAAAGTGTGCAGCTGATTGTATATTTGCGCCTTATTTCTGCTCGGAACAAGGCCCTGCTAGATTTGCAGCCATCCATAAGGTGTTTGGTGCTAGTAATGTTTCCAAACTGCTCTTGCACGTACCGGCTCATGATCGTTGTGAGGCTGTCGTCACTATTGCCTATGAAGCCCAGGCTCGGATTAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAACTGATGCAATTGAAGGCTCAGCTGGCGCAGAACCAAATGGATTCGAGGAGCTCGGAGAATCAGTGGGCTGGGAATGTTGCTGGGCAACCAAGTAATCCATATTGTCCCACTTACACCAACCCTATATCTCCTCAGAGTTCCCTTGAGTCAATAGACCACAGCATGCAAGAAACTTGTTCTCAGAAAAGGTCATACAACAACGACTTGGGTGAGCTTGAAGAACTGGCACTCAGGATGATGAGGAACTAG 597 0.4941 MASATSGNGSGSGSGSGSGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQLKAQLAQNQMDSRSSENQWAGNVAGQPSNPYCPTYTNPISPQSSLESIDHSMQETCSQKRSYNNDLGELEELALRMMRN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3073 198 PANTHER LOB DOMAIN CONTAINING PROTEIN 19 178 - -
Glsi02g3073 198 Pfam Lateral organ boundaries (LOB) domain 23 121 IPR004883 -
Glsi02g3073 198 MobiDBLite consensus disorder prediction 1 20 - -
Glsi02g3073 198 Coils Coil 103 130 - -
Glsi02g3073 198 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3073 Glsi-ChrGlsi02 79327798 79328693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3073 12 198 AS2 family AT2G42430 55.372 2.03e-79 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi02g3073 LOB 5.4e-37 No_clan