Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3072 ATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGCGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCACGAACAGGGCGCTACCCATTTTGCAGCCATTCATAAGGTGTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCCCACCTCCCAGTGACTGATCGTTGCGAAGCTGCAGTAACAATCTCTTATGAAGCTCAAGCCAGACTTCAGGATCCAATTTATGGCTGTGTTTCTCATATTTTCGCACTCCAACAACAGGTGGTCAATTTACAAGCACAATTAGCTTATCTCAAGGAACAAGCAGGTCATACCTATGTCAATGCCTCTGCCACTGAAAACCCTAATAATGAAAAATACTCTGGAAAACTTACTGCTTTCTCTGATCATGATCTTCAAAAATGGTTCCAGACGGTGGAAAATCCCAACGTGGGGCCGCAATTGCTCCCTAACTTGTCTAATAACTTCTTAGCAACACAATACTATGGGAATACAAGTCTCATGATGGATCCAAACCCTATTGGGAATGTTCATGGAAATTCAGGGACCCAGATGGAAGAAAGTATCTCATTTTCGAGCTTTGACGAGAATTCTAACTCAATGTCCTATGATATGCAAACAAACAGCAAGCAGTGGGCGTTTCATGAAGTGGATGACCTTCAGTCAGTGGCTTTTGGTTACATTCGATGA 708 0.4322 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAGHTYVNASATENPNNEKYSGKLTAFSDHDLQKWFQTVENPNVGPQLLPNLSNNFLATQYYGNTSLMMDPNPIGNVHGNSGTQMEESISFSSFDENSNSMSYDMQTNSKQWAFHEVDDLQSVAFGYIR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3072 235 Coils Coil 87 107 - -
Glsi02g3072 235 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Glsi02g3072 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 200 - -
Glsi02g3072 235 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3072 Glsi-ChrGlsi02 79318815 79319619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3072 7 234 AS2 family AT3G58190 50.216 3.13e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi02g3072 LOB 6.3e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3072 02 79318815 79319619 Glsi02g3072 02 79318815 79319619 ECH