Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3068 ATGAGTGAGACCCTTCCACATCCCGAGCACGACGCCGTTTCTTCAGTAGAGGAGAACAGTCAAGGTCCAAGCATTTTCGTCATTGTCCTGCGATGCCCCGCCTCCTCCATCTCTGAGGATGTCGATGATCCTGGGGGCATGTGTTGGAATAATCACAGACTTCGTTCTTCTGAGATTGTACTACCCGGAGGAATCGTATTGGAACTATATGCATCATATTTTTACCCGGCTTCAGCTCCAAATGCATGTGAAGAAATAATAATGCAGAATGAGATATTCAAAAAGAAGTGGAAGAAAGACCTCAAGTTTCTTTCAAGTCTGAAGTTGAGGAAGAAGCAGTCGTTTCCTCATTCTCAGTCTTCAGTTTTTGATAGAAACCCCAGATCTGTCTACCGTGTTTCTTTGAGCTCCAAAACCCCAGAGAAGGCTCCGCAGCTGTTACACCGTTCACGACACCGCGGCGTTGAGCTCTCCATCAAAGAAATCAAGAAGGTCGCTGAAAGCCTTCAGGCACGGAATCGCCAGCGGCAAAATCAAGGCCTACAGTATGAAATTTTGGGTGAATTCTTCGACAGCTTGGATAGCTCCATTCGATTGTGGCATCTGAAAGTTTCGACAACAACTTTCACGAATATCTGCCCTAAGATTGAATGTTTAACTGATAGGTGGTTTACACATGTTCATCTGGCCCAGTTCAAATATATTTTACCTGAGGCAGTTGTTATAACGAAGGTACTCAGGTTTGATGAACGGACAAGTTGTATGAAGCCAGATCTCCATGTTATAGTAAATTTAGACAGATTACAGGGTGATGAAATTCCAGAAGAAATACTGCCTGATCCATTCAATCAGCCTAAGCAAGACCATCTTTTGGAAACATTGAGAATTCTCTCCTCTTCATTTGCTGCTATGACATCATATGATACATTTGCATCTCATCATCCAGCTGTAGCACCTGCATGCAGGCAGGGCAATGCCATTGCAGATAATTCAGAGCCTACTAAGGGAGAAGAAAACTTTATTGAGTATGCAGAGAAGGAAGATGGGTCTCTCAGAAACATTGCTGCCACGTCTACACCAGCTAAACTTGCTTCTACCCCTTCATTGCCTCTGCCTAAGAGATCTTACATGAGCCCTGATGACAGCTCTTTGAGCTCACCAAACAAGTTGGTTAGGCGTCCACCTCATTTGAGGTCATTGAAATTTGATACTCCAGTGAAAAATGAGGAGGCAGACAATAAAGCTGATGATGCTGGTGGCTTATCAATTGATGATGATATTTTTTATATTCTCCTAGAGAATCTTCTCCCATCGTTATGGCCTAAACCTCAATTACTATTGGTTCTTGAGACTGGGTTATTCTCATCATCTGTGGCAGCTTGCAATATTTTCTTCTGTTTATTGATTAATATTAGAGAAAAGGAGAGGATAGCAATGGAGGAAAGAAATCCAGCTATCTCACAAGCAGAGAGAATGACATGGACCAAGGGGGTTCTTGCTTTCCCCATTTTTCAGTGGGTCCCAGGTGCTGGTCCTACAGTGAAATGTGGTCCTAATGGAATCCAGTATCAGCTAATACTAACCAAGACCCTTGAGTGGACCTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGGTGTGTTAATTATTATAGATACATGTTCTCATACATTTTCAGGGATGAATATAGTGTCATGGTTAGCAATGTACTTTATGTACTTCAGTGTCATTTAGCTTTCTATACTGTCTCCATGCCACAAGAAGGACTTCCCGTATCTGTTCCCTTCCCCATCTTTGTGATGTTTGTAACTGGCAAGGCTAGTACTATGCTGGATGAAGTGGAGCTGCTACTTAGAAGGTTGTTGGCTTTTGCAACAACAAGTTCAGCAGGAGCATTAGTTTCCTCCATGTCTTCAATGAATCCATCCAGTATACTGAATCTGGAAGCTCCTATTATGCATTTCTGA 1968 0.4268 MSETLPHPEHDAVSSVEENSQGPSIFVIVLRCPASSISEDVDDPGGMCWNNHRLRSSEIVLPGGIVLELYASYFYPASAPNACEEIIMQNEIFKKKWKKDLKFLSSLKLRKKQSFPHSQSSVFDRNPRSVYRVSLSSKTPEKAPQLLHRSRHRGVELSIKEIKKVAESLQARNRQRQNQGLQYEILGEFFDSLDSSIRLWHLKVSTTTFTNICPKIECLTDRWFTHVHLAQFKYILPEAVVITKVLRFDERTSCMKPDLHVIVNLDRLQGDEIPEEILPDPFNQPKQDHLLETLRILSSSFAAMTSYDTFASHHPAVAPACRQGNAIADNSEPTKGEENFIEYAEKEDGSLRNIAATSTPAKLASTPSLPLPKRSYMSPDDSSLSSPNKLVRRPPHLRSLKFDTPVKNEEADNKADDAGGLSIDDDIFYILLENLLPSLWPKPQLLLVLETGLFSSSVAACNIFFCLLINIREKERIAMEERNPAISQAERMTWTKGVLAFPIFQWVPGAGPTVKCGPNGIQYQLILTKTLEWTLNWCILQSMFDRCVNYYRYMFSYIFRDEYSVMVSNVLYVLQCHLAFYTVSMPQEGLPVSVPFPIFVMFVTGKASTMLDEVELLLRRLLAFATTSSAGALVSSMSSMNPSSILNLEAPIMHF 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3068 655 PANTHER DNA REPLICATION FACTOR CDT1 271 491 IPR045173 GO:0003677|GO:0030174|GO:0071163
Glsi02g3068 655 SMART CDT1_2 181 280 IPR014939 -
Glsi02g3068 655 SUPERFAMILY "Winged helix" DNA-binding domain 181 273 IPR036390 -
Glsi02g3068 655 MobiDBLite consensus disorder prediction 357 392 - -
Glsi02g3068 655 Coils Coil 159 179 - -
Glsi02g3068 655 Pfam DNA replication factor CDT1 like 182 244 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3068 Glsi-ChrGlsi02 79285021 79296808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3068 182 419 Core DNA Replication Machinery Family AT3G54710 36.101 8.60e-37 142