Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3066 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTGATTGGAAGTATGCCATCTTTTGGAAACTCAAACATCGAGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTGATGATTATAACTCTTCAGAGAATAAGTGCTGCCAGAAGACCTCGGAACAGATTCATGGTGGTCAATTTTCACACGACCCTCTTGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATACGTTAGGGGAAGGTATTGTTGGGCAGGTAGCTGTTACCGGAAAGCATCAGTGGATCTGTGCAAATAATCAAGTTACAGGCTCTGGCTCATCATATGAGTTCGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATCAGGACCATTGTGGTTGTAGCTGTAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAATGTGATTGAAGATATGGGGATTGTAACTCATATCAGAAATCTTTTTCTGGCTGCTCAACATAACTCGGTAGGCCGTGTTCTTAGTCAAATACAAAGTAGTGTGAAGAATTCTTCATCTCAGGATGCAGAGAAAACTGCAAAGAGTGAAACACAAAATAATTTAATGTCCCTTCCATTATTTGGAAAGAACTTTTCACCTCCTGTTCATCAGAAAATGGCTGTTGATATGGCCAAGCACTGGGGGGCTGAATTTAAATGTGATGAAAGTTCCGTTTTGCTTCAGTCAATGTCAAATATGATGAATCTGGAGGATCGGAAATTTGTGGAGATGAGACCTCTAAATGAGAGAGAATGTGAAGGGGACAGTAGCGGCTGCCAAGATATGATGGTGGAATCAGAAAAAAATATCTCATCATTGGTACACAGTTCAGTTATAAATAATAATTGCTTCAATGATTTAATACAGACATCAGAAAAGGTTGGAGTTGATTTTGCCTGCATGCCTGCGGACTTTCTTGATGCTATTTGTGAAAATGATAAGTTACATTATGTGGATCTTAGCCCAAACGGGATTCCCAGTGTCCCCAGACCTTCAGATGCAAACTACCACAAGGAGTTTCAGTCTGAGCCTTGTTATGAGGATGCCTCATACACGTTGTTGAAGTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCAGATTTTCTGAAAAATAGTAAATATTTTGACTGGAAGGCACGGGTGAATCAAGATATTAAAATTGTGGAGATGCCAGATGAGATTAGCTGTAGCCAGTCGACTTCTGAATCTCGTCCGGAGCCTCTTTTGGAAGCAGTAGTGGCCAATGTTTGTCACAGTAATAATGATGTAAGTAGTGAGTTGTCACTTTGTAAATCAGTGCAGTCTGGCATGGCATCTGGAAGAAATCCTGAAGCTTCTATTCACACCATGCATACTATTAATTCAGAAGGTCATTCCATAGATCAGCCCTCTCTTGTCAGAGAGGACAAACAGCACTGTTTGAGTTCATCCGGCATTTGTGATGTGGTGTCCCCCAAAGGTTTTTCGTCTACGTGTCCTAGTTCATGTAGTGAACAGTTTGAAAGATCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGCCTGGGGAAACTTGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATCAAGGAGTTGAGAGAGCTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTCTTGCAGAGCATAACTAAGCATGCTGACAAGCTAAATAAAATCACTGATTCCAAGACAAAGTCGCATCACATGGAAACAGATGCTCGTGGATCCTCTAGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGACATCTAAAAGTTCATTCAATACTAGTGGAGAATCTTAGCAAGAATGGGCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCACGCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGTCTGACAATTTTGAAGGGTGCAACAGAAGCTCAGGGTGAGAAGACATGGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATATACACAGATTGGATATCTTGTGGCCACTTGTTCAAATACTGCAATCCCAGAGTAGCATGTATTCACAATAA 2157 0.4223 MGTNLHQVLRSLCLNTDWKYAIFWKLKHRARMILTWEDAYYDNPDDYNSSENKCCQKTSEQIHGGQFSHDPLGLAVAKMSYHVYTLGEGIVGQVAVTGKHQWICANNQVTGSGSSYEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNNVIEDMGIVTHIRNLFLAAQHNSVGRVLSQIQSSVKNSSSQDAEKTAKSETQNNLMSLPLFGKNFSPPVHQKMAVDMAKHWGAEFKCDESSVLLQSMSNMMNLEDRKFVEMRPLNERECEGDSSGCQDMMVESEKNISSLVHSSVINNNCFNDLIQTSEKVGVDFACMPADFLDAICENDKLHYVDLSPNGIPSVPRPSDANYHKEFQSEPCYEDASYTLLKFPAGCELHEALGPDFLKNSKYFDWKARVNQDIKIVEMPDEISCSQSTSESRPEPLLEAVVANVCHSNNDVSSELSLCKSVQSGMASGRNPEASIHTMHTINSEGHSIDQPSLVREDKQHCLSSSGICDVVSPKGFSSTCPSSCSEQFERSSEPAKNKKRARPGETCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKITDSKTKSHHMETDARGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECTHFLEIAEAIRSLGLTILKGATEAQGEKTWICFVVEGQNNRNIHRLDILWPLVQILQSQSSMYSQ 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3066 718 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 532 581 IPR011598 GO:0046983
Glsi02g3066 718 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 715 IPR043561 GO:0003700|GO:0006355
Glsi02g3066 718 MobiDBLite consensus disorder prediction 514 546 - -
Glsi02g3066 718 MobiDBLite consensus disorder prediction 522 546 - -
Glsi02g3066 718 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3066 Glsi-ChrGlsi02 79268130 79274100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3066 375 714 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 51.811 1.39e-94 308