Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3045 ATGTCTTCTTTTGCGTTTGAGCACCCAGCAGATTGGGAGTTCTGGCAGGAGCCGTCTGATAGTTTCTTGGAATATTTTTCAAGTAACCAAGTTCGTGAAGACCCTTTCCAGGATTCTCTTTCCTTCGACATGGTGGATTGTACCGATCCGCAAGCACCAACCTACGGGAATGAGTTTGACTCTGATTCAAAGCAAGTTGTGGGGAACTCGGAAGCCAAAGAAGGACAGAAGAGTAAGGAGAAATCATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATTTGCAGCAGAGATAAGAGATACAACCAGGAATGGAGCTCGGGTTTGGCTTGGAACCTTTGATAGTGCAGAGGCAGCTGCTTTAGCTTATGATCAAGCTGCATTTAGCATGAGAGGCCCAACGGCTGTTCTTAATTTTCCGGTGGAGAGGGTGAAGGAATCTCTGCAAGAGATCAAGTATGGTTCGCGCATAGGGTGTTCGCCTGCTTTGGAACTCAAACAGAGGCACTGCATCCAAAGAAAATTGTTGTCAAAGGCTAGGAAAGTTAAAGACAAACAGAAATCAGAGGCACCAACTGTGGTGGTGCTTGAGGATTTGGGAGTTGAATATCTAGAGCAACTTCTGAGCATTTCAAGCCCCAGCCCTAGCTGCTTCAAATAA 660 0.4636 MSSFAFEHPADWEFWQEPSDSFLEYFSSNQVREDPFQDSLSFDMVDCTDPQAPTYGNEFDSDSKQVVGNSEAKEGQKSKEKSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDSAEAAALAYDQAAFSMRGPTAVLNFPVERVKESLQEIKYGSRIGCSPALELKQRHCIQRKLLSKARKVKDKQKSEAPTVVVLEDLGVEYLEQLLSISSPSPSCFK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3045 219 MobiDBLite consensus disorder prediction 54 72 - -
Glsi02g3045 219 MobiDBLite consensus disorder prediction 47 78 - -
Glsi02g3045 219 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 PANTHER DNA-BINDING DOMAIN 61 209 IPR044808 GO:0003700|GO:0009873
Glsi02g3045 219 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 FunFam Ethylene-responsive transcription factor 2 81 142 - -
Glsi02g3045 219 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Glsi02g3045 219 SUPERFAMILY DNA-binding domain 82 142 IPR016177 GO:0003677
Glsi02g3045 219 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3045 Glsi-ChrGlsi02 79075359 79076018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3045 35 214 AP2-EREBP Transcription Factor Family AT3G23240 52.747 2.86e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g3045 AP2 9.7e-15 CL0081