Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3044 ATGGAGGGGGGGAAAGTTTCCAAGAAAAAATCAGATGTGATTGGTTACAGAGGGATTCGTAAGAGACCTTGGGGTAAGTTTGCAGCGGAGATTCGAGACCCCACAAGAAAAGGGATTCGTTTATGGCTCGGGACCTTTGACACTGCTGAGGAGGCTGCTAGGGCTTACGATACTGCCGCTTTTCGTTTCCGGGGTCACAAAGCCATTCTCAACTTCCCCACTCACTACCCATTTCATAACCCTGGCTCTTCTTCTCCTTCTTCGTATTGTGGTAAGGGCCTTGTGGAAGCGGCTTCCTCAACAACACCCCAAGGAAACCATACTATAGAACTGGAATACTTGGACAATAAGTTGCTGGACGAACTCCTTCACCCATAA 378 0.4841 MEGGKVSKKKSDVIGYRGIRKRPWGKFAAEIRDPTRKGIRLWLGTFDTAEEAARAYDTAAFRFRGHKAILNFPTHYPFHNPGSSSPSSYCGKGLVEAASSTTPQGNHTIELEYLDNKLLDELLHP 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3044 125 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 PANTHER DNA-BINDING DOMAIN 11 96 IPR044808 GO:0003700|GO:0009873
Glsi02g3044 125 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Glsi02g3044 125 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Glsi02g3044 125 FunFam Ethylene-responsive transcription factor 2 14 74 - -
Glsi02g3044 125 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3044 Glsi-ChrGlsi02 79063602 79063979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3044 16 123 AP2-EREBP Transcription Factor Family AT3G23230 55.752 3.05e-36 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g3044 AP2 5.9e-14 CL0081