Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3029 ATGGTTTCGCTCTCAACTTGGTTTCGATACATTGCTCACAAGCTCGAATACTCCGTATCCATCGGCTGGAAGAACTATAAAGGAGGTCAAATTTCAGACAGAGAGGTAAGTGATGTTTGGAAGAATTTCCTTCAAGGAAAGTTGACATACGTGCACTGGAATAAAGGAGAGGAAATGGCGCCAACCATATCTGGACAAGGAGCAACTCTTCTTGTTCGGAAATTACCAAAAGCAGACCCAACGCGTGTTTTTGTAGGAGATGTTGTGGTCTTAAAGGACCCTGAGAAGCAAAATAATCATCTCATCAGAAGACTAGCTGCCATTGAAGGTTATGAAATGGTTTCTACTGATGAAAAGGATGAACCCTTCGTTCTTGAGAAGGATCAATGTTGGGTGTTGGCTGACAATGAAAATTTGAAGCCCAAGGAAGCATATGACAGTCGGATATTTGGTCCAGTTCAAATGACGGACATTGTGGGCAGAGTCATATATTGCTTGCGAACTGCTGTTGACCATGGCCCTATAGAGAACAGTGATTTTGGCATGCACAAGGATTCGCCAGTGTTAGAAGTGGAACTGGATGTTGATGAGATGGCAAAGACCGACAAAACTTGA 615 0.4309 MVSLSTWFRYIAHKLEYSVSIGWKNYKGGQISDREVSDVWKNFLQGKLTYVHWNKGEEMAPTISGQGATLLVRKLPKADPTRVFVGDVVVLKDPEKQNNHLIRRLAAIEGYEMVSTDEKDEPFVLEKDQCWVLADNENLKPKEAYDSRIFGPVQMTDIVGRVIYCLRTAVDHGPIENSDFGMHKDSPVLEVELDVDEMAKTDKT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3029 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 203 - -
Glsi02g3029 204 Gene3D Umud Fragment, subunit A 45 173 - -
Glsi02g3029 204 CDD S26_SPase_I 55 162 IPR019533 GO:0004252|GO:0006465
Glsi02g3029 204 SUPERFAMILY LexA/Signal peptidase 55 166 IPR036286 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3029 59 175 MADS-box Gene Family AT1G29960 32.258 1.01e-08 50.1