Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3015 ATGAAAGTGGGATTTGAGGCGGTTCATTGGAATTCAAACATGATCCGACCCCATATGCATGAATCTTGGGACTACCCAAATGTTGGGTTCTCAGCTCCAACCCCATCAAACCAATTTTCAAAGCCAGAAATTGATCACAACCACAGCGTAAACTTGGCGCAGCAGAACGAGCTCTCGGATTGGATGGAGCACATTACCAAACACCTGGTGGATGACGATAACTTGCTCGCTTATAACCAAACAAGATCTTCCCAGGACAACTTTGTCCCCTCACTTTCATCCATCCTCAATCCAACAAGAAAACCCACTTGGAGAACCCAAGTTGATCCCTCCAACAATGAACTTCAAATTAGCAGTAACATCGAGCTTCACACTCAAACATTAAACCCTTCAGATCATCATAACCACGGCAATGATGGGTTAAACCTTTTGACCCTTCTAATGGAGAGTGCTGTAGCAATCTCTGTTGATAACCTTGGTGAGGCTCACAGGATGTTACTTGAGCTAACCCATGTGGCCTCACCATACAAGCCATCCTGTGCTGAGCGGGTTGTTGCTTATTTCGCTAAGGCCTTGGCTAGTAGGGTTATGAATTCTTGCCTTGGGACTTCCTCTCCTTTAATTGATCACAGAAGCATCCATTCTGCATTCCAAGTGTTCAACAATATTTCCCCTTTCATCAAATTCGCTCATTTCACTTCCAACCAGGCCATACTTGAGGCATTGCACCGTTGTGATAGTGTTCATATCATTGACTTAGACATCATGCAGGGGCTACAATGGCCAGCTTTCTTCCACATCCTCGCAACCCGAATGGAGGGGCCACCACATGTTCGAATGACGGCCATGGGAACCTCAATGGAGCTCCTTGTTGAGACTGGAAAACAGCTCTCCAATTTTGCCAGAAGGCTTGGCATGTCGTTAAATTTCCAACCAATTGCAAGAAAGTTTGGAGAAATAGATGTTTCCATGATGCAAGCAAGGCCTGGTGAGACACTAGCCGTGCATTGGTTGCAGCACTCACTTTATGATGCAACTGGACCAGATTGGAAAACTCTGAGACTCCTTAAGGAGTTGGAGCCAAGAATTATCACTTTGGTAGAGCAGGATGTTTCACAATATGGTGGGTCATTTTTGGACCGTTTTGTTGGCTCTTTGCACTATTACTCTACCCTGTTTGATTCTCTGGGAGCATATTTCCCTAGTGAGGACCCCAATAGGCAGAGTGTTGAGCATGGCCTTCTCTCTAGGGAGATCAACAATATACTGGCCATAGGAGGCCCTGCGAGAAGTGGGGAAGATAAGTACAGGCAGTGGAGAAGTGAGCTTGAGAGGCATCGTTTTGTGCAAGTTCCAATGAGCGCTAATTCAATGGCTCAAGCACAATTGATACTCAACATGTTTTCACCAGCAGCTTATGGGTATAGCCTTGCTCAAGTTAATGGCACATTAAGGCTTGGATGGAAAGACACTAGTTTGTATACTGCTTCTGCATGGACCTGTAATACTTCTAGGTAG 1518 0.4539 MKVGFEAVHWNSNMIRPHMHESWDYPNVGFSAPTPSNQFSKPEIDHNHSVNLAQQNELSDWMEHITKHLVDDDNLLAYNQTRSSQDNFVPSLSSILNPTRKPTWRTQVDPSNNELQISSNIELHTQTLNPSDHHNHGNDGLNLLTLLMESAVAISVDNLGEAHRMLLELTHVASPYKPSCAERVVAYFAKALASRVMNSCLGTSSPLIDHRSIHSAFQVFNNISPFIKFAHFTSNQAILEALHRCDSVHIIDLDIMQGLQWPAFFHILATRMEGPPHVRMTAMGTSMELLVETGKQLSNFARRLGMSLNFQPIARKFGEIDVSMMQARPGETLAVHWLQHSLYDATGPDWKTLRLLKELEPRIITLVEQDVSQYGGSFLDRFVGSLHYYSTLFDSLGAYFPSEDPNRQSVEHGLLSREINNILAIGGPARSGEDKYRQWRSELERHRFVQVPMSANSMAQAQLILNMFSPAAYGYSLAQVNGTLRLGWKDTSLYTASAWTCNTSR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3015 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 103 496 IPR005202 -
Glsi02g3015 505 Pfam GRAS domain family 144 500 IPR005202 -
Glsi02g3015 505 ProSiteProfiles GRAS family profile. 134 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3015 Glsi-ChrGlsi02 78801146 78802663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3015 133 500 GRAS Transcription Factor Family AT3G54220 54.133 4.14e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi02g3015 GRAS 1.6e-103 CL0063