Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3014 ATGGATCATGTAATTGCTGGGAAGTTTAAACTAGGAAGGAAGATTGGTAGTGGATCTTTTGGCGAGCTTTATTTAGGCGTAAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAAGCATCCCCAGCTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGAATTCCCCACCTCAAGTGGTTTGGCGTCGAGGGAGACTACAATGTCATGGTCATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTTAACTATTGCAACCGGAAGTTCACGTTGAAGACTGTATTGATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGACATAAAGCCTGACAATTTTCTTATGGGCTTAGGGCGTAAAGCAAACCAGGTGTACATCATTGACTATGGCCTTGCAAAGAAGTATAGGGACCTTCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACGGGCACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGGTTGGATATTTGGCAAAGAAATCTACTTTACCCCCTACTTGATGTTGGATATTATGACAATATCTTACTATTGGCTTTCTTCATACCATCCTTTTGTTGTTTTAGTCTTCCTTGGCAGGGACTGAAGGCTGGCACCAAAAAGCAAAAATATGATAAGATCAGCGAGAAGAAGATGTCAACTCCCATAGAGGTGCTCTGCAAAACATATCCGTCTGAGTTTGTATCATACTTCCACTACTGTCGATCATTGCGTTTTGAGGACAAGCCCGACTATTCATATTTAAAGAGGCTTTTTCGAGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGATTGGACTATATTGAAGTATCCTCAGATTGGTTCTAGCTCTAGAGGACGGCATGGCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTGTGCAAAAGCCAGAAAAGATGTCAGTAGGGAAAGATATGCGAGAGAAATTCTCTGGTGCTGTTGAATCATTCTCCCGGAGGAACCCCACAAGTTCTAGTCCTCGTCGTGATCAAACCAAACATAGAATGTTTGAGGAGTCACCAATACATAGGGATATGCACCATGAACATGAGAAGGGATGCAGTTCTACTCGACATGGCAGCAGTTCAAGAAGAGCCATCATCTCATCAAACAAGCCAAGTTCCTCAGGTGATCATAGTGATAGTCGTACTGGCAGGCTGACTTCAGGCAGTAGCCGTCCATCTACCACACGCCCTCTGTATGAGAGCAAGCAACCAACTCTTACACGCAATGGATCTACAAGACGCAACCGTGATGATCCTCTCCGGAGCTTTGAGCTTCTCTCTATTAGGAAGTAA 1479 0.43 MDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGRLDIWQRNLLYPLLDVGYYDNILLLAFFIPSFCCFSLPWQGLKAGTKKQKYDKISEKKMSTPIEVLCKTYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHGSGKAAMNAGPSVQKPEKMSVGKDMREKFSGAVESFSRRNPTSSSPRRDQTKHRMFEESPIHRDMHHEHEKGCSSTRHGSSSRRAIISSNKPSSSGDHSDSRTGRLTSGSSRPSTTRPLYESKQPTLTRNGSTRRNRDDPLRSFELLSIRK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3014 492 MobiDBLite consensus disorder prediction 419 472 - -
Glsi02g3014 492 MobiDBLite consensus disorder prediction 360 374 - -
Glsi02g3014 492 SUPERFAMILY Protein kinase-like (PK-like) 4 212 IPR011009 -
Glsi02g3014 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Glsi02g3014 492 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Glsi02g3014 492 CDD STKc_CK1_delta_epsilon 8 317 - -
Glsi02g3014 492 Gene3D Transferase(Phosphotransferase) domain 1 223 373 - -
Glsi02g3014 492 MobiDBLite consensus disorder prediction 386 418 - -
Glsi02g3014 492 SUPERFAMILY Protein kinase-like (PK-like) 225 325 IPR011009 -
Glsi02g3014 492 Pfam Protein kinase domain 10 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3014 492 PANTHER CASEIN KINASE-RELATED 9 435 - -
Glsi02g3014 492 MobiDBLite consensus disorder prediction 335 492 - -
Glsi02g3014 492 Gene3D Transferase(Phosphotransferase) domain 1 86 220 - -
Glsi02g3014 492 MobiDBLite consensus disorder prediction 473 492 - -
Glsi02g3014 492 ProSiteProfiles Protein kinase domain profile. 9 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3014 492 SMART serkin_6 9 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3014 492 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Glsi02g3014 492 FunFam Putative Casein kinase I 1 85 - -
Glsi02g3014 492 FunFam CK1 family protein kinase 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3014 Glsi-ChrGlsi02 78791633 78797132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3014 2 219 Miscellaneous Gene Families AT1G29230 26.222 2.94e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Glsi02g3014 Pkinase 9e-24 CL0016