Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3008 ATGGCTGGGTTGTACAGGCGGTTACTTCCTTCCCCACCTGCAGTTGATTTCGCTTCCTCCGAAGGAAAGCAACTTTTTCTTGAAGCCATTCAAAATGGAACAATGGAATGCTTTTATAGATTAGTTTGTTATTTTCAAACACAATCAGAGCCTGCATACTGTGGATTGGCTAGCTTATCCATGGTTTTAAATGCTCTTGCTATTGATCCTGGAAGAAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTTTAGAAAAGGTCAAAGCTAGAGGCATCTCATTTGGCAAGCTTGTATGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCATGCAAATCAAAGCAACATTGATGACTTTCGTAAATATATCATGAGGTGTTCAACTTCTGATGATTGTCATGTAATCTCATCATACCACAGAGCTGCTTTCAAACAAACGGGAACTGGTCATTTTTCTCCTATTGGCGGTTATCATGCTGGAAAGGATATGGCACTTATTTTGGATGTTGCACGTTTTAAGTATCCTCCACATTGGGTCCCACTTACACTTCTCTGGGAAGGCATGAACCATGCTGATGAAACCACTGGACAATCCAGGGGGTTCATGCTTATATCAAGGCCTCACAGGGACCCTGGTATGCTTTACACTCTGAGCTGTAAACATGAGAGTTGGATTAGTATTGCTAAATTCCTAATGGATGATGTTCCTCTTCTACTAAAGTCAGAGGATGTGAAAGACGTTGACAAGGTTCTCTCAGTTGTAGTCACTTCGCTTCCATCTAATTTTGGGGAGTTTATCAAGTGGGTTGCAGAGATCAGGAGGCAAGAGGACGGAGGTCCAAGTTTAAGTGCAGAGGAGAAAGCAAGGCTTTCTATCAAGGCAGAAGTGTTGAAACAGGTACAGGAGACAGGGCTTTTTAAACACGTGTCTTCTTTTCTGTCGAATTCTCGCTGTCGGCTGTCATCAATTTCAGGTCATGGAGACACCTTACCTGACATTGCAGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAGCTTAGCTCATCAGCAGTATATTGCTGTCGAGAAACCTGTATGAAATGCTTGAATGTAGAGGGCGACAAGCCAATCACAATGGTTTGTGGGACTGTGGTGAATGGTAACAGTGAACAAGGGGTTGATGTTTTGATTCCTTCTCCTGGGAGACCATGTTGTACTTGCTCTGGACCAAGTAAGTACATTGAGATGCACCCAGCTAGCTGTGACATTCTTACAGTGCTGCTACTTTCATTACCATCTACCACGTGGGTTGGTATCAAAGATGAGCGGCTTTTGAAGGAAATAGACGGCCTTGTTTCAACTGATAATCTCCCTACTTTGCTGCAAGAAGAGGTTTTGCACCTAAGACGTCAATTAAACCTTCTCAAGAGATGTCAAGAGAACAAGGTAGATGAGAATCTTGGTGCACCTCACTCTTAG 1497 0.4315 MAGLYRRLLPSPPAVDFASSEGKQLFLEAIQNGTMECFYRLVCYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKARGISFGKLVCLAHCAGAKVEAFHANQSNIDDFRKYIMRCSTSDDCHVISSYHRAAFKQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWVPLTLLWEGMNHADETTGQSRGFMLISRPHRDPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKDVDKVLSVVVTSLPSNFGEFIKWVAEIRRQEDGGPSLSAEEKARLSIKAEVLKQVQETGLFKHVSSFLSNSRCRLSSISGHGDTLPDIAASVCCQGAEILGGKLSSSAVYCCRETCMKCLNVEGDKPITMVCGTVVNGNSEQGVDVLIPSPGRPCCTCSGPSKYIEMHPASCDILTVLLLSLPSTTWVGIKDERLLKEIDGLVSTDNLPTLLQEEVLHLRRQLNLLKRCQENKVDENLGAPHS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3008 498 Gene3D - 14 219 IPR038156 -
Glsi02g3008 498 SUPERFAMILY Cysteine proteinases 11 215 IPR038765 -
Glsi02g3008 498 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 13 218 - -
Glsi02g3008 498 Pfam Domain of unknown function (DUF1984) 229 478 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Glsi02g3008 498 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 2 477 IPR040409 GO:0016756|GO:0046872|GO:0046938
Glsi02g3008 498 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 219 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Glsi02g3008 498 Pfam Phytochelatin synthase 5 211 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3008 Glsi-ChrGlsi02 78756912 78761336 Tandem