Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2991 ATGGAAGCGCGCACTGCTTTTTCTGTTGACAGATCAAGTGCAAAGCAGCTTAATAACGTGGGGATGTCTGGAGCACTGTCTTCATCCTTGCCTGTCCACCCAATGCCCCTAGAAGAGACATATTCCAAGGTGCCTGATTCTCAGCGGGCCTCTGTTGAAAAAGAGCCCACGACAAGACCTCTTACTCATTCAAGTCATTTAAATTCCAGCGGAGTAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCAACCGATCTTCATCACTCATCCCTTTCACCTCATGAAAACCACTCAAGAAATGCCCATTTTATTTCACAGTCCTCAAGTAACTTGGCATCGTTGCCATTGCCATATTCTTCAAATACTGGACCACTTACTTCTACAACATCAAGTTGTTATTCCAAAGAAAGCAGTGCTTCCTGGCATACAGATTCCCTGCCAAGCTTTCTTGATTTTCCTGTAAATACCTCCATTGAGAATAATCAAGTAGAAAGCAGTGCCTGCACTATAATGGCATCTGAGGAGTACTGTAAGAAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGACACTTTGACTTCTAATTGGGACGATCTTCTTGCTGACACCAACATTCATGATCTTGAACCAAAGGTGGCGTGCCAGGTTTCAAAATTGTCTTCACAATTTCCAGGACAAGAGTCCCAAGGTCATCAGCAGCTTCCCGCTTCATCAGGAGAAAATCGTGTTGGTGCTCCACTTTCTTCCTCAGCAAATTCTGCTCCTGCCAAACCAAGAATGCGTTGGACGCCAGAGCTTCATGAGGCCTTCGTGGAGGCCGTCAACCAACTTGGGGGGAGTGAAAGAGCAACCCCTAAGGGTGTGCTGAAGCTTATGAAAGTTGAATGCTTAACGATATATCATGTTAAAAGCCACTTGCAGAAATATAGGACAGCTAGATATAGACCGGAGTCATCCGAAGGATCCTCGGAGAAAAAATTAACTCCCATTGAAGAGATTTCATCTCTAGACTTGAAAACTGGTATTGAGATAACTGAAGCTCTGAGATTGCAGATGGAGGTTCAGAAGCGGCTGCACGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGGATTGAAGAACAAGGAAAGTACCTGCAGATGATGTTTGAGAAGCAATGCAAATCTGGCATCGAAAAGTTTAAGCCAGCATCGTCTTCCATGGAGAGTCCTTCTGGAGTGTCATCAGATACTATTAAAGATTCTCTGGCCAAAATTGAAATGGAAGCCTCCCAAGTGGACCATTGCAAGTCAGGATCTGAACAAGATAATGGCAACACAGTCGAAGAAAGCTCACTGAAAGTGGTTGAGAAGCATAATGCTTCCGAAAGCCAAACTTTTGACAATCCTAAGCAACATGCTAGTGAAGATAATGTTCAAGCCCCAAAGCGTCAACGAACAGACGAATAA 1464 0.4413 MEARTAFSVDRSSAKQLNNVGMSGALSSSLPVHPMPLEETYSKVPDSQRASVEKEPTTRPLTHSSHLNSSGVVGHMFSSSPGYSTDLHHSSLSPHENHSRNAHFISQSSSNLASLPLPYSSNTGPLTSTTSSCYSKESSASWHTDSLPSFLDFPVNTSIENNQVESSACTIMASEEYCKKNDWQEWADQLISDDDTLTSNWDDLLADTNIHDLEPKVACQVSKLSSQFPGQESQGHQQLPASSGENRVGAPLSSSANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVECLTIYHVKSHLQKYRTARYRPESSEGSSEKKLTPIEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGKYLQMMFEKQCKSGIEKFKPASSSMESPSGVSSDTIKDSLAKIEMEASQVDHCKSGSEQDNGNTVEESSLKVVEKHNASESQTFDNPKQHASEDNVQAPKRQRTDE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2991 487 MobiDBLite consensus disorder prediction 224 261 - -
Glsi02g2991 487 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 435 449 - -
Glsi02g2991 487 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Glsi02g2991 487 Gene3D - 261 320 - -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 424 487 - -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 224 264 - -
Glsi02g2991 487 Coils Coil 350 370 - -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 54 90 - -
Glsi02g2991 487 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 235 475 IPR044848 GO:0003700
Glsi02g2991 487 FunFam Myb family transcription factor 261 319 - -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 456 474 - -
Glsi02g2991 487 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 9 26 - -
Glsi02g2991 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 319 IPR017930 -
Glsi02g2991 487 MobiDBLite consensus disorder prediction 1 99 - -
Glsi02g2991 487 NCBIfam myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2991 Glsi-ChrGlsi02 78641820 78646530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2991 1 404 G2-like Transcription Factor Family AT4G28610 50.843 4.03e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi02g2991 Myb_DNA-binding 1.9e-07 CL0123