Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2989 ATGAAGGCATCGGTGCGGCAGAAAGGGCTGTCATTTCGCATATATAAAACTAGATTTTCTCATCGCCCCCCGAGAGTGAAGAGAGGTAGAGGGCTTCAGTGTGCAACAATGTCGAAGAGAGGTCGCGGTGGATCGGCCGGGAACAAGTTCCGGATGTCACTTGGTCTGCCGGTGGCGGCGACGGTGAACTGCGCCGACAACACTGGAGCTAAGAACCTATACATCATTTCTGTGAAGGGGATCAAGGGTCGCCTCAACCGTTTGCCTTCTGCTTGCGTGGGTGATATGGTCATGGCCACCGTGAAGAAAGGAAAGCCTGATCTCAGGAAGAAGGTCTTGCCAGCGGTCATCGTACGCCAGCGCAAGCCATGGCGCAGAAAGGACGGCGTCTACATGTACTTCGAAGATAATGCAGGTGTGATCGTGAATCCCAAGGGTGAAATGAAGGGTTCCGCTATCACTGGTCCAATTGGAAAGGAGTGTGCTGATCTGTGGCCAAGGATTGCCAGTGCTGCCAATGCTATCGTTTGA 531 0.5311 MKASVRQKGLSFRIYKTRFSHRPPRVKRGRGLQCATMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2989 176 SUPERFAMILY Ribosomal protein L14 47 176 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi02g2989 176 ProSitePatterns Ribosomal protein L14 signature. 115 141 IPR019972 -
Glsi02g2989 176 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 56 175 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi02g2989 176 Hamap 50S ribosomal protein L14 [rplN]. 55 176 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi02g2989 176 SMART Ribosomal_L14_2 55 176 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi02g2989 176 Gene3D Ribosomal protein L14 37 176 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi02g2989 176 FunFam 60S ribosomal protein L23 37 176 - -
Glsi02g2989 176 Pfam Ribosomal protein L14p/L23e 58 176 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2989 Glsi-ChrGlsi02 78627397 78631881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2989 37 176 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 1.27e-98 279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2989 02 78627397 78631881 Glsi11g0775 11 4868908 4870911 CCT
Glsi02g2989 02 78627397 78631881 Glsi02g2989 02 78627397 78631881 ECH