Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2984 ATGGAGCCCCGTGCGGCGCCCAACAGTCTAACAAAACCCCTAGGTTTAATCTTTGCAAAACCAGAACTCTCTGGAACGACAAGGTCTGTTCAGCCATTCAGATTTTCTGAAGGTAAAAGACCTGTTTATCTGAGTATGGGAGACACCGAAACAGTTGCCGAAACATCTGCAGCTGTGAGCTACACATCCGATAGCTATACTTCAACTGGCTATGCTGATGCCTACCCAAATCCTGCTCATGAGGCAGTTGCTACTGTTGCCGAGTCTACTGGAGAAGCTGATCAGTCTAATGCAACATATGGATTAAATTGTCCTAATTTTGGAGATGGGAATGCGTATGGCGGGGATCCTAATTCTGTTCTACAACAAGCCCAGTTCAACACAACAGATGGGACTAAACAAACTGATATTAATCAGACTGCCAGTGGGAACACAGCTACGGAGTCTGCTCAAGTGTCTGACTATAATTCAGCTGTTAATGGGGCAATGATAAATGCCACAGGACTTGAGAATGGGAGTGCGTTGGAGAATATGGATGGATCAGGTGCTGAGAAACAGCTTGCAGATAGTTATGCAGCTGCAGTGTCTGCTGAGGAAGATCGGCTGTGGAATATTGTAAGAGCTAATTCTTTAGATTTTAATGCTTGGACTGCCCTGATTGAGGAGACAGAGAAAGTGGCAGAGAACAACATTTTGAAGATCCGAAAAGTTTATGATGCTTTTCTAGGAGAATTTCCTTTGTGTTATGGTTATTGGAAGAAGTATGCTGATCACGAGGCTCGCCTTGGTTCCATTGATAAAGTTGTTGAAGTTTATGAACGGGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGAAACAGTTCGTAGGCTTTTTGAACGGGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATTGAATATGAATACATGCAGCAGGACTGGGCCCGTCTTGCCATGATCTACACCAGAATACTAGAGAATCCAAATCAACAACTGGATCGGTATTTTAGCAGCTTCAAGGAGTTAGCTGGAAATCGGCCTTTGTCAGAATTACGTACTGCTGATGAGGCAGCAGCAGAAGCAGGTGCAGTTTCAACAGATGGTGGCCAAGCTAATGAAGGAGAGGTTCATCCTGATGGTGTGGAAAATTCTCCTAAACCTGTAAGTGCTGGCTTAACAGAAGCAGACGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCCCTCAATGTTGCGGAGCTTGAGAATTGGCATAATTATCTGGATTTTATAGAAAGGGAAGATGACTTCAGCAAGCAACTTTTTAATGGGGAAATTGAACTGAGACTAAAGCATGGGCCTTCGATTTGGTTTCTTGAGGCTAAGTCTCTTGTTGTGAAGTTGTATGAAAGATGTGTCATTGCGTGTGCCAATTATCCTGAGTACTGGATGCGTTATGTTTTATGTATGGAAGCCAGCAGAAGCATGGATCTTGCAAACAATGTACTTGCTCGGGCAACACAAGTGTTTGTCAAGAGGCAACCTGAGATACATCTTTTTTCTGCTCGGTTCAAGGAGCAGAATGGGGATTTAGCTGGTGCTCGAGCTGCCTATCAACTTGTGCATGCTGAAATTTCTCCTGGTCTTCTTGAAGCAATAATCAGGCACGCTAATATGGAAAATAGACTGGGTAATTTGGAGGATGCATACACTTTATATGAACAGGCCATTGCCATTGAAAAAGGAAAAGAGCATTCACAAACATTGCCAATGCTGTATGCTCAGTATTCTCGGTTTGTTTGTATGGTTTCTGGGAACGCAGAAAAGGCTAGGCAGATTCTAATTGAGGGACTTGACCATGTTCAATCACCAAGACCAGTACTTGAGGCTTTGTTACATTTTGAGGCTATTCAACCTCTACCAAAGCAAGTTGATATCAACTTTCTAGATTCATTGGTTGTCAAATTCATAATGCCTAGCCCAGAGAACCCAAATATTGCAAGTGCAACCGATAGGGAGGAACTTTCTAGCATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCCATCAAGAGAGCTGAGGATAGGCATGCCAAACTCTTCTTGCCTCATAGGAGTATGTCGGAGTTAAAAAAACGTCATGCAGAGGATTTTCTCACATCAGATAAAACAAAAATGGCAAGAACTTACTCTGTTCCGTCACCTGCCCAATCATCAGTGGGTGCATATCCGAATGCACAGAACCAGTGGGCAACTAGTTACGGAGTCCAACCTCAAGCTTGGCCACCAGTCTCGCAAGCACAGGGGCAACAGTGGGCTGCTGGCTATGCCCAGCAGGGTGCCTATGGGGCTTATGCTGGATATGGGAGCAGTTATGCCAACTCACAGTTGCCTACGTCGGCTCCCCAAAGTACTGCATACGGAGCCTACCCTCCTGCCTATCCTGTACAGCCGGCCCTTCCCCAAACAAATTATGCGCAGCCTGCTGCTGCTCCTGCACTGCAACCTGCTTCAGTTCCTCAAGCCTATTATGGGAGTGGTTATTACTGA 2685 0.4417 MEPRAAPNSLTKPLGLIFAKPELSGTTRSVQPFRFSEGKRPVYLSMGDTETVAETSAAVSYTSDSYTSTGYADAYPNPAHEAVATVAESTGEADQSNATYGLNCPNFGDGNAYGGDPNSVLQQAQFNTTDGTKQTDINQTASGNTATESAQVSDYNSAVNGAMINATGLENGSALENMDGSGAEKQLADSYAAAVSAEEDRLWNIVRANSLDFNAWTALIEETEKVAENNILKIRKVYDAFLGEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPETVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADEAAAEAGAVSTDGGQANEGEVHPDGVENSPKPVSAGLTEADELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFIEREDDFSKQLFNGEIELRLKHGPSIWFLEAKSLVVKLYERCVIACANYPEYWMRYVLCMEASRSMDLANNVLARATQVFVKRQPEIHLFSARFKEQNGDLAGARAAYQLVHAEISPGLLEAIIRHANMENRLGNLEDAYTLYEQAIAIEKGKEHSQTLPMLYAQYSRFVCMVSGNAEKARQILIEGLDHVQSPRPVLEALLHFEAIQPLPKQVDINFLDSLVVKFIMPSPENPNIASATDREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLTSDKTKMARTYSVPSPAQSSVGAYPNAQNQWATSYGVQPQAWPPVSQAQGQQWAAGYAQQGAYGAYAGYGSSYANSQLPTSAPQSTAYGAYPPAYPVQPALPQTNYAQPAAAPALQPASVPQAYYGSGYY 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2984 894 MobiDBLite consensus disorder prediction 130 149 - -
Glsi02g2984 894 FunFam Putative pre-mrna-processing factor 39 204 374 - -
Glsi02g2984 894 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 457 774 - -
Glsi02g2984 894 Gene3D Tetratricopeptide repeat domain 204 370 IPR011990 GO:0005515
Glsi02g2984 894 MobiDBLite consensus disorder prediction 382 412 - -
Glsi02g2984 894 Coils Coil 592 619 - -
Glsi02g2984 894 Gene3D Tetratricopeptide repeat domain 458 782 IPR011990 GO:0005515
Glsi02g2984 894 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 188 889 - -
Glsi02g2984 894 SMART hat_new_1 229 261 IPR003107 GO:0006396
Glsi02g2984 894 SMART hat_new_1 503 535 IPR003107 GO:0006396
Glsi02g2984 894 SMART hat_new_1 607 642 IPR003107 GO:0006396
Glsi02g2984 894 SMART hat_new_1 263 295 IPR003107 GO:0006396
Glsi02g2984 894 SMART hat_new_1 298 333 IPR003107 GO:0006396
Glsi02g2984 894 SUPERFAMILY TPR-like 424 750 IPR011990 GO:0005515
Glsi02g2984 894 SUPERFAMILY TPR-like 206 365 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2984 Glsi-ChrGlsi02 78581379 78591349 Dispersed/Wgd