Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2979 ATGAAGAAGAAAAAGATGCCATTCCAAACTCAGCTCTTCTTCTTCTTCTGTTACATTATTTGTTTCTCATATGGTCTTGCTTTTGCAGTGAATGATGAAGTATCTGCTTTACTTTCTATAAAAGCAGGTCTTGTTGATCCGTTGAATAAGCTGCAGGATTGGCAATTGTTTGACAAAGCACCAGGGAAAAATGCAGCTCATTGCAACTGGACTGGTGTTTGGTGCAATTCTGGTGGAGCTGTTGAGAAACTTGATCTTTCCCACATGAATCTCAGTGGCAAAGTATCCAATGAGATACAAAAGCTAAACAGTCTCAAATCTCTCAACTTGTGCTGCAATGGGTTCTCAACAACATTACCAAAATCCATAGCCAACCTCACCACATTGAGAAGTCTGGATGTCAGCCAGAATTTTTTCATAGGTGATTTTCCATTAGGCCTTGGAAAGGCGCTACGACTTATGACCTTAAATGCATCCGGCAATGATTTCTCAGGGTTTGTTCCTGAGGACCTTGGAAATGCTTCTTCTTTAGAGACGCTGGATCTTCGAGGCAGCTTCTTTGAAGGGTCTGTTCCAAAATCTTTCAGTAGCTTGCGGAAGTTAAAGTTCCTTGGTCTTTCAGGAAATAATCTCACTGGAAAAATTCCAGGAGATCTGGGACAGCTTTCATCACTGGAGTATATGATTCTTGGGTACAATGAATTTGAAGGTGGGATTCCAAGAGAGTTTGGAAATCTCACTAACCTTAATTATCTTGATTTGGCAGAAGGCAATCTTGGAGGTGAGATTCCAGCTTCATTGGGAAACATTAAATCATTAAACACAGTTTTCTTATACAAGAACAACTTTGAAGGTAGAATTCCACCAGCTGTGGGCAACATGACTTCATTGTTGTTGCTGGATCTCTCTGACAATATGCTATCAGGAGAAATTCCAACTGAAACAAGTCAGCTGAAGAATTTAGAGCTTCTTAATTTTATGCGCAACCAGCTATCTGGCCCTCTGCCTTCTGGCCTTGGGGATCTGCCTCAATTAAAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGACATTGCCCAGTAACCTTGGCAAGAATTCCCCATTGCAGTGGCTGGATGTATCCTCCAACTCAATTTCTGGTGAGATTCCAGAAACACTTTGCAGCCAGGGTACTCTCACCAAGCTTATCCTTTTCAGTAATGCCTTCTCGGGTCCAATTCCAGTTAGCCTATCAACATGTCCTTCACTCGTTCGAGTTCGAATTCAGAACAATTTTCTAACCGGGACGATTCCAGTGGGTCTTAGCAAACTTGGAAATCTTGAAAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGAAATTCCTGATGATATTGCTTCTTCCACATCCCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCCTCCACCATTCTTTCTACTCCAAATCTCCAATCCTTCATGGTCTCCCACAACAACTTGGAAGAAGAAATCCCAGACCAATTCCAGGACTGTCCTTCACTTAGCGTTCTTGATCTGTCGTCAAATCGTTTCACTGAAAGTATTCCAGCCAGCATTGCTTCTTGTCAGAAATTGGTAAATTTGAACCTAAGGAGCAACCAATTGACTGGTGAAATCCCGAAAGCACTAGCCACCATGCCTTCATTGGCTATTCTTGATCTTTCCGACAACTCTCTGACTGGTCAAATACCTGATAGCTTTGGTATTTCTCCAGCTCTGGAAGCACTCAATGTCTCATACAACAAGCTTGAGGGTCATGTCCCAACAAATGGCGTGCTTAGAACAATAAACCCAAGTGATTTTGCAGGTAATGCTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGGCCAAAACTCTGCATATGCATTAAGGCGTGGGAGCTCACAAGCAAAGCACGTAATTGCAGGATGGGTTATTGGAATATCATCAATCTTGGCCATTGGGATTGCAATTTTGGTTGCTAGATCTATATACATGAGGTGGTACTCTGATGGCTTCTGTATTCGAGAAATATTTTATGAGGGTAACAAAGGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACCAGTACTGACATTCTAGCTTGCATCAAGGAAACCAATGTAATTGGAATGGGAGCAACTGGGGTTGTTTATAAGGCTGAGATACCACAATCAAATTCAGTCGTGGCAGTGAAAAAATTGTGGAGATCAGGATGTGATATTGAAGTAGGAAGCAGTGATGACCTCGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGACATAGAAATATTGTTAGACTACTAGGATATCTTCATAATGACACTGATGTTATGATAGTTTATGAATTTATGCACAATGGCAACCTCGGAGATGCCTTGCATGGCAAACAAGCAGGGCGACTGCTTGTAGACTGGGTTTCGCGGTATAACATAGCTCTAGGAATAGCACAAGGACTTGCTTATCTTCATCAGGATTGTCATCCACCCGTCATCCACCGAGACATCAAGTCAAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGGTTAGCCAAAATGATGGTCAGGAAAAATGAAACAGTCTCCATGGTTGCTGGGTCCTATGGCTACATTGCCCCGGAATATGGATACAGCTTGAAGGTGGATGAAAAGACTGACATTTACAGTTATGGAGTAGTTCTGCTGGAGCTTCTCACAGGAAAGCGGCCACTAGATTCTGAGTTTGGAGAATCTGTAGACATTGTAGAGTGGATTAGAAGGAAGCTTAGAGGCAACAAGTCTCTAGAAGAAGCCCTAGATCCCAGCGTAGGAAACTGCAGCCATGTTCTAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACAACCAAGCTCCCTAAGGACAGACCCTCCATGACGGATGTCATAATGATGCTTGAAGAGGCAAAGCCCCGTAGAAAAAGCAGTAGCAACAATGAAACTTCTACAGCTAATAAAGAGATGCCAGTTTTTAGCACATCACCAATTAATGGGCTTCTTTAG 3069 0.4249 MKKKKMPFQTQLFFFFCYIICFSYGLAFAVNDEVSALLSIKAGLVDPLNKLQDWQLFDKAPGKNAAHCNWTGVWCNSGGAVEKLDLSHMNLSGKVSNEIQKLNSLKSLNLCCNGFSTTLPKSIANLTTLRSLDVSQNFFIGDFPLGLGKALRLMTLNASGNDFSGFVPEDLGNASSLETLDLRGSFFEGSVPKSFSSLRKLKFLGLSGNNLTGKIPGDLGQLSSLEYMILGYNEFEGGIPREFGNLTNLNYLDLAEGNLGGEIPASLGNIKSLNTVFLYKNNFEGRIPPAVGNMTSLLLLDLSDNMLSGEIPTETSQLKNLELLNFMRNQLSGPLPSGLGDLPQLKVLELWNNSLSGTLPSNLGKNSPLQWLDVSSNSISGEIPETLCSQGTLTKLILFSNAFSGPIPVSLSTCPSLVRVRIQNNFLTGTIPVGLSKLGNLERLELANNSLTGEIPDDIASSTSLSFIDFSRNNLHSSLPSTILSTPNLQSFMVSHNNLEEEIPDQFQDCPSLSVLDLSSNRFTESIPASIASCQKLVNLNLRSNQLTGEIPKALATMPSLAILDLSDNSLTGQIPDSFGISPALEALNVSYNKLEGHVPTNGVLRTINPSDFAGNAGLCGGVLPPCGQNSAYALRRGSSQAKHVIAGWVIGISSILAIGIAILVARSIYMRWYSDGFCIREIFYEGNKGWPWRLMAFQRLNFTSTDILACIKETNVIGMGATGVVYKAEIPQSNSVVAVKKLWRSGCDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGYLHNDTDVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHQDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYSLKVDEKTDIYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKLRGNKSLEEALDPSVGNCSHVLEEMLLVLRIALLCTTKLPKDRPSMTDVIMMLEEAKPRRKSSSNNETSTANKEMPVFSTSPINGLL 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2979 1022 Gene3D Transferase(Phosphotransferase) domain 1 797 1015 - -
Glsi02g2979 1022 SUPERFAMILY RNI-like 263 599 - -
Glsi02g2979 1022 Pfam Leucine rich repeat 487 547 IPR001611 GO:0005515
Glsi02g2979 1022 FunFam Leucine-rich repeat receptor protein kinase EMS1 287 369 - -
Glsi02g2979 1022 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Glsi02g2979 1022 Gene3D Ribonuclease Inhibitor 339 634 IPR032675 -
Glsi02g2979 1022 MobiDBLite consensus disorder prediction 990 1022 - -
Glsi02g2979 1022 Gene3D Ribonuclease Inhibitor 29 194 IPR032675 -
Glsi02g2979 1022 SMART LRR_typ_2 294 318 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 558 582 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 102 126 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 438 462 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 198 222 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 510 534 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 486 509 IPR003591 -
Glsi02g2979 1022 SMART LRR_typ_2 342 366 IPR003591 -
Glsi02g2979 1022 FunFam MDIS1-interacting receptor like kinase 1 797 1007 - -
Glsi02g2979 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 30 185 - -
Glsi02g2979 1022 SMART serkin_6 712 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2979 1022 ProSitePatterns Protein kinases ATP-binding region signature. 718 742 IPR017441 GO:0005524
Glsi02g2979 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 370 631 - -
Glsi02g2979 1022 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Glsi02g2979 1022 PANTHER RECEPTOR-LIKE PROTEIN 55 359 992 - -
Glsi02g2979 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Glsi02g2979 1022 Pfam Leucine Rich Repeat 176 198 IPR001611 GO:0005515
Glsi02g2979 1022 SUPERFAMILY Protein kinase-like (PK-like) 708 989 IPR011009 -
Glsi02g2979 1022 Pfam Protein kinase domain 714 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2979 1022 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 186 286 - -
Glsi02g2979 1022 Gene3D Ribonuclease Inhibitor 273 338 IPR032675 -
Glsi02g2979 1022 Gene3D Ribonuclease Inhibitor 205 272 IPR032675 -
Glsi02g2979 1022 SUPERFAMILY L domain-like 67 360 - -
Glsi02g2979 1022 MobiDBLite consensus disorder prediction 998 1022 - -
Glsi02g2979 1022 FunFam MDIS1-interacting receptor like kinase 1 712 796 - -
Glsi02g2979 1022 ProSiteProfiles Protein kinase domain profile. 712 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2979 Glsi-ChrGlsi02 78552023 78555236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2979 11 1022 Receptor kinase-like Gene Family AT1G08590 60.213 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi02g2979 Pkinase 8.2e-47 CL0016