Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2978 ATGGAATCCAAAATTCAACTCTTTTTTTCCACCTTTTTCCTCTACATTCTTTCCATCCATGCAGAAACTCTTCGAACTTACATAGTTCAACTACACCCACATGGTACAACCAGATCCCTTTTCCCCTCTAAGCTGAATTGGCATCTTTCATTTATACAACAAACCATTTCCTCTTTTGAGGACCCTTCCTCTCGCCTTCTTTACTCTTACCGTTCTGCCATGGACGGGTTTGCAGCTCAGCTAACTCAGTCTGAGCTTGAGTACTTGCAAAAGTTGCCTGATGTTATCTCAATTAAACCTGACCGGCAACTTCAGATTCACACTACCTATTCTTACAAGTTCTTGGGACTGAACCCTGCTAGAGAAGATACTTGGTATCAGTCTGGATTTGGCCGTGGAACCATAATTGGGGTGCTTGATACTGGAGTGTGGCCAGAGTCTCCCAGCTTCAATGATCGTGGAATGCCTCCAATTCCCAAGAAATGGAGAGGTATATGCCAAGAAGGTCAGGCCTTTAACTCTTCCATTTGCAACCGAAAACTCATTGGCGCTAGGTACTTCACCAAAGGCCATCTTGCAGCCTCACCATCAGGAATTCCAGAGTATCTCTCACCAAGAGACTCTTCTGGTCATGGCACACACACTTCATCCACGGCTGGTGGAGTAGCAGTGCCAATGGCAAATGTGCTTGGTTATGCAGCGGGTGTGGCAAGAGGGATGGCTCCTAGTGCCCACATTGCCGTGTACAAAGTGTGCTGGTTCAATGGCTGCTACAACTCTGATATCCTGGCTGCAATGGATGTAGCAATCAGAGATGGTGTGGACGTTCTCTCCTTGTCTCTTGGTGGCTTCCCATTACCGCTATACGATGATAGTATTGCCATTGGAAGCTTTCGAGCTATGGAACATGGAATTTCAGTCATATGTGCAGCGGGAAACAATGGCCCAATAGCAATGTCTGTCGCCAATGAAGCTCCTTGGATTGCCACTGTTGGCGCAAGCACACTGGACAGGAAATTCCCAGCTATAGTTCACATGGGTAATGGACATGTTCTCTATGGAGAATCCATGTACCCAGGGGACCCACTTATGAGCACTGGCAAAGAACTTGAGCTGGTTTATGTGACTGATGGAGACAGGGAAAGTCAATTTTGCCTCCGAGGGTCTCTTCCGAGGCACAGAGTTCAGGGGAAAATGGTTGTCTGTGATCGAGGTGTTAATGGAAGAGCAGAAAAAGGTCAAGTCGTGAGGGAAGCTGGTGGTGCCGCCATGATTTTGGCAAACACAGAGATAAACTTGGGAGAGGATTCTGTTGATGTTCATGTCTTGCCTGCAACCTTGGTAGGCTTTGATGAATCAATTCTCTTGAAATCTTATATAAACTCAACAATGAGACCTCTTGCTCGAATTGAATTTGGAGGAACTGTAATAGGCAAGTCTAGAGCTCCAGCCGTAGCTCGATTTTCTGCTAGAGGACCCAGTTTTACTGACCCTTCAATCCTCAAACCAGATGTAATTGCCCCAGGCGTCAACATCATTGCTGCTTGGCCTCAAAACTTGGGTCCTACAGGCCTTCCAGAAGATTCTAGAAGGGTCAGCTTCTCTGTCATGTCTGGTACCTCAATGTCCTGTCCTCATGTCAGTGGAATTGCTGCTCTTATCCGTACAGCTCACCCAAAATGGAGCCCTGCAGCTATCAAATCTGCAATTATGACAACAGCCCAGGTAACTGACCATACAGGAAGACCAATTCTAGATGAAGATAAACCAGCTGGGGTTTTCGCCATGGGAGCTGGGCACGTGAACCCGGAAAGAGCTATAAACCCAGGACTGATATATGATATTAAGCCAGATGACTATGTTACTCATCTTTGCAGTCTGGGGTATACAAAATTAGAAGTGTTCAGTATCACTCACAGAAATGTGAGCTGCCAGGAAATCATGAAGATGAACAGAGGGTTCAGCCTTAACTATCCTTCGATCTCTGTAACTTTTAAGGATGGGACGAGGAGGAAGATTTTCAGCAGGCGACTAACAAATGTGGGAAGCCCTAACTCCATCTACTCAGTGGAAGTTACGGCACCTGAAAATGTAAAAGTGATAGTGAAACCTAAACGGCTGGTATTTAAACACAGAAATCAAAGCTTGAGATACAGGGTGTGGTTTGTATCAAGAAAAGCAAGAGGTGCTAATTCTATGGCCTTCGCAGAAGGGCATTTGACATGGGTACACTCTCCAAATGGTTCCTACAGGGTCAGGAGCCCAATAGCAGTGACTTGGAAGGGTAAGTAG 2292 0.4603 MESKIQLFFSTFFLYILSIHAETLRTYIVQLHPHGTTRSLFPSKLNWHLSFIQQTISSFEDPSSRLLYSYRSAMDGFAAQLTQSELEYLQKLPDVISIKPDRQLQIHTTYSYKFLGLNPAREDTWYQSGFGRGTIIGVLDTGVWPESPSFNDRGMPPIPKKWRGICQEGQAFNSSICNRKLIGARYFTKGHLAASPSGIPEYLSPRDSSGHGTHTSSTAGGVAVPMANVLGYAAGVARGMAPSAHIAVYKVCWFNGCYNSDILAAMDVAIRDGVDVLSLSLGGFPLPLYDDSIAIGSFRAMEHGISVICAAGNNGPIAMSVANEAPWIATVGASTLDRKFPAIVHMGNGHVLYGESMYPGDPLMSTGKELELVYVTDGDRESQFCLRGSLPRHRVQGKMVVCDRGVNGRAEKGQVVREAGGAAMILANTEINLGEDSVDVHVLPATLVGFDESILLKSYINSTMRPLARIEFGGTVIGKSRAPAVARFSARGPSFTDPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVSFSVMSGTSMSCPHVSGIAALIRTAHPKWSPAAIKSAIMTTAQVTDHTGRPILDEDKPAGVFAMGAGHVNPERAINPGLIYDIKPDDYVTHLCSLGYTKLEVFSITHRNVSCQEIMKMNRGFSLNYPSISVTFKDGTRRKIFSRRLTNVGSPNSIYSVEVTAPENVKVIVKPKRLVFKHRNQSLRYRVWFVSRKARGANSMAFAEGHLTWVHSPNGSYRVRSPIAVTWKGK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2978 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 107 IPR037045 -
Glsi02g2978 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Glsi02g2978 763 Gene3D - 337 477 - -
Glsi02g2978 763 ProSiteProfiles Serine proteases, subtilase domain profile. 109 607 - -
Glsi02g2978 763 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Glsi02g2978 763 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Glsi02g2978 763 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Glsi02g2978 763 Pfam Subtilase family 131 577 IPR000209 GO:0006508|GO:0008236
Glsi02g2978 763 Pfam Peptidase inhibitor I9 26 107 IPR010259 -
Glsi02g2978 763 Pfam PA domain 371 451 IPR003137 -
Glsi02g2978 763 SUPERFAMILY PA domain 365 434 IPR046450 -
Glsi02g2978 763 Pfam Fibronectin type-III domain 656 758 IPR041469 -
Glsi02g2978 763 Gene3D - 624 760 - -
Glsi02g2978 763 Gene3D Peptidase S8/S53 domain 133 620 IPR036852 GO:0004252|GO:0006508
Glsi02g2978 763 CDD Peptidases_S8_3 104 574 IPR034197 -
Glsi02g2978 763 CDD PA_subtilisin_like 344 470 - -
Glsi02g2978 763 SUPERFAMILY Protease propeptides/inhibitors 47 106 - -
Glsi02g2978 763 SUPERFAMILY Subtilisin-like 106 611 IPR036852 GO:0004252|GO:0006508
Glsi02g2978 763 FunFam Subtilisin-like protease SBT1.9 16 107 - -
Glsi02g2978 763 FunFam subtilisin-like protease SBT1.5 337 477 - -
Glsi02g2978 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 758 IPR045051 -
Glsi02g2978 763 FunFam Subtilisin-like protease SBT1.5 133 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2978 Glsi-ChrGlsi02 78545997 78548288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2978 1 761 Subtilisin-like Serine Gene Family AT1G04110 67.571 0.0 1092