Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2966 ATGATATTGCTGGTGGCAGCTTTTCTGCACAGATTCATACTGGAAATGATGTTGGAGACGATCAACTTGGTGATTGTTAACGTGAAAGCAATTCTTCGGAGAGGATGTTTGGAACAAGAATTTGATTGTTATGGTTTTGGGGCCAAACAAATATGTATAGCGGCCGTGGCCTGGGAACCGAATAAGCCATTGACGATCGAAGACCTTCAGGTGGCTCCGCCTCAGGCTGTGGAGGTTCTGGTCCAAATTATGTTTAATGCTCTCTGTCACACCGATGCTTATACTTGGATCGGCAAGGACCCAGAAGGTCTCTTCCCACGTATTCTTGGTCATGAAGCTCCTGGGGTCGTAGAAAGTGTTGGAGAAGTTGTTACAGAAGTTCAGCCTGGAGATCATGTCATCCCCTGTTACCAGGCTGAATGTAGAGAATGCAAGATTTGCAAATCAGGCAAAACAAACCTTTGTGGAAAAGTTCGTGCTGCTACCGGAGTTGGAGTCATGTTGAGTGATCGCAAGAGTCGTTTCTCTATTAATGGAAAGCCCATCTATCATTTTATGGGAATCTCAACCTTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCCAAGACTGATCCAAAAGCTCCCTTGGAGAAAGTTTGTCGTCTGGGATGCGGTGTTCCAACTGGTCTTGGAGCTGTCTGGAACACTGCAAAGGTAGAACCAGGGTCAATTGTTGCTGTTTTTGGCCTTAGAACTGTTGGGCTTGCTGTTGCAGAGGGGGCTAAAACTGCTGGTGCATCACGAATAATTGGCATAGATATTGACAGCAAAAAGTTTGACGTAGCAAAGAATTTCGGAGTCACTGAATTTATTAATCCGAAAGACCATGAAAAACCAATTCAGCAGGTCATAGTTGATCTCACAGATGGTGGTGTTGATTATAGTTTTGAGTGCATTGGGAATGTCTCAGTGATGAGAGCGGGTTTGGAATGCTGCCACAAGATGAGTGCTACTTCGATTGTTGGCCCAAATGTAACACTGGTGGTTGTAAAGATGAAGCATATTTTCTTGTTAAAAAACTTCCAGGGCTGGGGGACATCAGTTATTGTCGGTGTTGCAGCATCTGGGCAGGAAATATCAACTCGCCCGTTCCAGTTGGGTGACTGGTCGTGTCTGGAAAGGAACAGGTTTTGGCTGCTTCAAGAGCCGGTCACAAGTGCCTTGGCTTGTGAACAGGAAATCAAGGTTGATGAGTACAGTACCCACAATTTTAACAAGGCATTAGATCCTATGCATGAGAGGGGATGTCTCCGTTGTGTTCTTGCAATGCATGTACGAGCCGCATTTTTAGAACTTCAATCGGTCCACCCAAAAAGAAGAAAGAAGCAAAACCACTGTAGGCTATGCTTGCAAGTATACATCGAACTTACCGACGGGGATCAACGTCTAATATGGTCAAATTATAGCTATTAA 1458 0.4451 MILLVAAFLHRFILEMMLETINLVIVNVKAILRRGCLEQEFDCYGFGAKQICIAAVAWEPNKPLTIEDLQVAPPQAVEVLVQIMFNALCHTDAYTWIGKDPEGLFPRILGHEAPGVVESVGEVVTEVQPGDHVIPCYQAECRECKICKSGKTNLCGKVRAATGVGVMLSDRKSRFSINGKPIYHFMGISTFSQYTVVHDVSVAKTDPKAPLEKVCRLGCGVPTGLGAVWNTAKVEPGSIVAVFGLRTVGLAVAEGAKTAGASRIIGIDIDSKKFDVAKNFGVTEFINPKDHEKPIQQVIVDLTDGGVDYSFECIGNVSVMRAGLECCHKMSATSIVGPNVTLVVVKMKHIFLLKNFQGWGTSVIVGVAASGQEISTRPFQLGDWSCLERNRFWLLQEPVTSALACEQEIKVDEYSTHNFNKALDPMHERGCLRCVLAMHVRAAFLELQSVHPKRRKKQNHCRLCLQVYIELTDGDQRLIWSNYSY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2966 485 PANTHER ALCOHOL DEHYDROGENASE 52 435 - -
Glsi02g2966 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 210 352 IPR036291 -
Glsi02g2966 485 Pfam Zinc-binding dehydrogenase 248 356 IPR013149 -
Glsi02g2966 485 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 110 124 IPR002328 GO:0008270|GO:0016491
Glsi02g2966 485 FunFam alcohol dehydrogenase 1-like isoform X1 60 223 - -
Glsi02g2966 485 FunFam S-(hydroxymethyl)glutathione dehydrogenase 224 355 - -
Glsi02g2966 485 SUPERFAMILY GroES-like 52 240 IPR011032 -
Glsi02g2966 485 Gene3D - 224 390 - -
Glsi02g2966 485 Pfam Alcohol dehydrogenase GroES-like domain 78 203 IPR013154 -
Glsi02g2966 485 Gene3D - 55 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2966 Glsi-ChrGlsi02 78422332 78428203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2966 52 312 Monolignol Biosynthesis Gene Families AT1G72680 25.843 1.23e-10 61.2