Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2961 ATGTGTTCCCACGCGACATTATTTGCTCTTAGTGGAAAGCATGCAATAAGCGCCGACCATGACAAGCGCAGCATTGAACCGTTTTCTAATAATGGGAAGTCTATTGATGATTTCAACAACTTGGGTCTAATGATCCATCCATGTTGCAACTTCAGTCTGGCTTCTGTCAGTCCTATAGTTGGGTCCCATGTTTGGGTGGAGGATCCTGATGCAGCTTGGATAGAAGGTGAGGTTTTGGAGGTTAATGGAGAAGAAATTAAAGTTCTTTGCACTTCAGGGAAGACGGTTAGTGTCAAATCTTTATGTATTTATCCAAAAGATACCGAAGCCCCACCATCTGGAGTGGATGATATGACAAAACTTGCTTATCTGCATGAGCCTGGAGTCCTAGACAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTCACAAAGCTTCCGCATTTATATGACAGCCATATGATGGCACAATACAAAGGGACTGCTTTTGGTGAGCTGAGTCCTCATCCCTTTGCTGTGGCAGATGCTGCATATAGGCTTATGATAAATGAGGGAATCAGTCAGTCAATATTGGTTAGTGGAGAAAGTGGGGCTGGTAAAACAGAAAGCACCAAGTTACTCATGCGTTATCTTGCTTATATGGGAGGGAGAGCTGCTGCTGAAGGTAGTAGGACTGTTGAGCAGCAAGTCCTAGAGTCTAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGCAGGGGAGAATTTCAGGAGCTGCTATTAGAACTTATCTGTTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCAGAGGATGTTCAGAAGTACAAATTGGGGAACCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGAAGGGATTGATGATTCTAAAGATTATATTGCAACTAGGAGAGCAATGGACATTGTTGGGATAAGTGCTGAGAAGCAGGATGCAATATTTCGAGTGGTTGCTGCAATTTTACATCTTGGAAATATTGAATTTGCAAAAGGGAAGGAAATAGATTCATCTATGCCCAAAGATGAAAAATCTGAGTTCCATCTACAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCGCTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACGATCACAAAGTCCCTGGATCCACAAACTGCTGCACTCAGCCGAGATGCGTTGGCTAAAATTGTGTACTCAAGGTTGTTTGACTGGCTGGTGGATAAAATTAATTGTTCCATTGGTCAAGACCCTGATTCAAAGTTCTTAATTGGTGTGCTGGATATTTATGGTTTCGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTAACCAATGAGAAGCTTCAGCAACATTTTAATCAGCACGTATTCAAAATGGAACAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTATTGACAATCAAGATATTCTGGATCTCATCGAAAAGAAACCTGGAGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGGTCGACACATGAAACTTTTGCTCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGTCGCGTAGTGACTTCACAATTTGCCATTATGCTGGTGAGGTCACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCTGAACATCAGGCTCTTCTTGGTGCTTCAACTTGCCCCTTTGTATCAGGCTTGTTTCCCCCTTCAACTGAGGATTCATCCAAACAATCAAAGTTCTCTTCAATTGGTTCACGGTTCAAGCAACAATTGCAAGCTTTACTTGAAACACTCAGTGCCACTGAGCCACACTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCAGCAATCTTTGAGAACAAAAATGTTTTGCTGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATCAGGATAAGTTGTGCTGGATATCCGACTAGAAAAACCTTTGATGAATTCGTGGATCGATTTCGCCTTCTTGCACCTGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGGCTTAAAGGCTATCAGATTGGTAGAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGGAGTGAGATCTTAGGAAAGTCAGCGAGCATTATTCAGAGGAAAGTTCGCTCTTATTTGGCCCGCCGAACTTTTGTCTTACTTCGCTTGTCTGCTATAATGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTCTTCAAAGGAATGCAGCACGAGGCTTCCAGTCTGATGATTCAGAGGTATTTCCGCATGCATATTGCTAGGAAGGCATACAAAGAATTGTATGCCTCTGCCGTTTCTATTCAGACTGGTATGCGGGGGATGGCTGCACGCTGTGAGCTATGCTTTAGGAGGCAGACTAGAGCAGCAGTTGTTATTCAGAGCCATTGCCGGAAATACTTGGCACAACTTCATTTTAAGAAGTTAAAGAAGGCAACAGTTACAACACAATGTGCATGGAGAGGAAGAGTTGCTCGGCAAGAGTTACGGAAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTACAAGCCGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGATTGCAGTTGGAGAAACGCATGAGGATTGACATGGAAGAGGCCAAAATAAAAGAAAATGAAAGATTACAGTCTTCTTTGCTTGAGATGCAACTTCAGTTTAAAGAAACTAAAGCACAGCTTGAAAAGGAACGTGAGGCTGCAAAAAGAGCAGCAGAGATTGTGCCAGTCATACATGAGGTTCCAGTTGTTGACCAAGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGCAACTCAAGAACATGGTGAGTTCACTGGAAATGAAAATTGATGAAACAGAAAAAAGGTTTGAAGAGGCAAACAGAATTAGTGAAGAAAGGTTGGAGCAAGCGTTGGAGGCAGAATCTAAAATAGTTCAGTTGAAGACTGCCATGCAAAGGCTTGAAGAGAAATTCTCCGATATTGAATCAGAAAAACAAATTCTGCTGCACCAGTCAATGCAAAATTCATTGGTGAAAAAGATGTCAGAGCACCTTTCAATCCCTGTAGCTGAGAAGTTGGAAAATGGTCACCACCAGATGGAAGAGCATAAAGCTGTTGAAGCCCTGAGTGTGACACCTGTGAAAAAGTTTGGTACAGAGTCTGATAGCAAATTGAGGAGATCCTACATTGAACGTCAACATGAGAATGTTGATGCACTTATCAACTGTGTTACAAAAAATATTGGGTTCATTCATGGAAAGCCTGTTGCTGCAATCACAATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACTAGTGTATTTGATCGCCTTATACAGATGATTGGTTCTGCCATTGAGAATCAAGATGATAATGATCTTATGGCCTATTGGCTGTCAAATACTTCTGCATTATTGTCTTTGCTCCAACAAAGTTTGAAATCTGGTGGTGCAACTGATGCAATTCCAGTTAAAAAACCACCTAATCCAACGTCCCTCTTTGGAAGAATGACTATGGGTTTTCGTTCATCCCCATCTGCCAACCTTGCTGCCCCAGCATTGGAGGTTGCACGCAAGGTAGAGGCCAAATACCCTGCTTTGCTGTTCAAGCAGCAGCTCACGGCTTATGTGGAGAAGATTTACGGCATAATACGGGACAACCTGAAGAAGGAGTTATCGTCATTGCTTTCATTATGCATCCAGGCACCAAGAACATCAAAAGGAGTGACACGGTCTGGCCGATCCTTTGGTAAAGATTCTCCAGCGGGCCATTGGCTGAGTATAATTGAATGCCTCAACACATTACTTTGTACTGTGAAAGAGAACTTTGTGCCTCCAGTACTTACCCAAAAGATATTCTGTCAAACATTCTCATACATTAATGTACAACTCTTCAACAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCAGAATTGGAGCTATGGTGCTGCCAAGCAAAGGATGAGTATGCAGGATCTTGTTGGGATGAACTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGAATTTCCTATGATGAAATTACCAATGATTTATGCCCTATCCTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTATTGGGATGGTAATTATAACACTCGAAGTGTATCTCCAGATGTCATTTCTAGCATGAGGGTGCTTATGGCTGAGGACTCTAATAATGCTCTCAGTGATTCGTTCTTGTTGGATGACAATTCCAGCATACCCTTTTCAGTGGATGATCTCTCTACATCACTGCAAGAGAAGGATTTCTCAGATGTGAAGCCTGCCGAGGAACTTCTTGAAAATCCAGCCTTCCAATTTTTAAATGAGTAG 4692 0.4141 MCSHATLFALSGKHAISADHDKRSIEPFSNNGKSIDDFNNLGLMIHPCCNFSLASVSPIVGSHVWVEDPDAAWIEGEVLEVNGEEIKVLCTSGKTVSVKSLCIYPKDTEAPPSGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGTAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGSRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQQGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVQKYKLGNPRMFHYLNQSNCYELEGIDDSKDYIATRRAMDIVGISAEKQDAIFRVVAAILHLGNIEFAKGKEIDSSMPKDEKSEFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKSLDPQTAALSRDALAKIVYSRLFDWLVDKINCSIGQDPDSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGEVTYQTELFLDKNKDYVVAEHQALLGASTCPFVSGLFPPSTEDSSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFRLLAPEALDGSSDEVTACKRILEKVGLKGYQIGRTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLARRTFVLLRLSAIMIQAACRGQLARQVFKGMQHEASSLMIQRYFRMHIARKAYKELYASAVSIQTGMRGMAARCELCFRRQTRAAVVIQSHCRKYLAQLHFKKLKKATVTTQCAWRGRVARQELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRIDMEEAKIKENERLQSSLLEMQLQFKETKAQLEKEREAAKRAAEIVPVIHEVPVVDQALLEKLTSENEQLKNMVSSLEMKIDETEKRFEEANRISEERLEQALEAESKIVQLKTAMQRLEEKFSDIESEKQILLHQSMQNSLVKKMSEHLSIPVAEKLENGHHQMEEHKAVEALSVTPVKKFGTESDSKLRRSYIERQHENVDALINCVTKNIGFIHGKPVAAITIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLSLLQQSLKSGGATDAIPVKKPPNPTSLFGRMTMGFRSSPSANLAAPALEVARKVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELSSLLSLCIQAPRTSKGVTRSGRSFGKDSPAGHWLSIIECLNTLLCTVKENFVPPVLTQKIFCQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKDEYAGSCWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDGNYNTRSVSPDVISSMRVLMAEDSNNALSDSFLLDDNSSIPFSVDDLSTSLQEKDFSDVKPAEELLENPAFQFLNE 1563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2961 1563 Gene3D - 304 362 - -
Glsi02g2961 1563 Gene3D - 491 675 - -
Glsi02g2961 1563 Pfam Myosin head (motor domain) 115 772 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Glsi02g2961 1563 Pfam DIL domain 1385 1487 IPR002710 -
Glsi02g2961 1563 PRINTS Myosin heavy chain signature 143 162 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 PRINTS Myosin heavy chain signature 200 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 PRINTS Myosin heavy chain signature 248 275 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 PRINTS Myosin heavy chain signature 481 509 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 PRINTS Myosin heavy chain signature 534 562 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 Coils Coil 929 963 - -
Glsi02g2961 1563 PANTHER MYOSIN 883 1497 - -
Glsi02g2961 1563 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Glsi02g2961 1563 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Glsi02g2961 1563 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 59 108 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 ProSiteProfiles Dilute domain profile. 1209 1509 IPR002710 -
Glsi02g2961 1563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 837 IPR027417 -
Glsi02g2961 1563 FunFam unconventional myosin-Va 837 885 - -
Glsi02g2961 1563 Coils Coil 975 1009 - -
Glsi02g2961 1563 SMART DIL_2 1384 1491 IPR002710 -
Glsi02g2961 1563 Gene3D - 885 934 - -
Glsi02g2961 1563 Gene3D - 837 884 - -
Glsi02g2961 1563 Gene3D - 787 836 - -
Glsi02g2961 1563 Coils Coil 1024 1100 - -
Glsi02g2961 1563 FunFam Class V myosin 491 629 - -
Glsi02g2961 1563 Pfam Myosin N-terminal SH3-like domain 60 100 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 SMART MYSc_2a 107 785 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Glsi02g2961 1563 FunFam unconventional myosin-Va 886 933 - -
Glsi02g2961 1563 CDD MYSc_Myo11 127 772 IPR036018 -
Glsi02g2961 1563 CDD MyosinXI_CBD 1160 1532 IPR037975 GO:0007015
Glsi02g2961 1563 ProSiteProfiles Myosin motor domain profile. 113 784 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g2961 1563 Gene3D Myosin VI head, motor domain, U50 subdomain 364 653 - -
Glsi02g2961 1563 SMART iq_5 882 904 IPR000048 GO:0005515
Glsi02g2961 1563 SMART iq_5 905 927 IPR000048 GO:0005515
Glsi02g2961 1563 SMART iq_5 857 879 IPR000048 GO:0005515
Glsi02g2961 1563 SMART iq_5 834 856 IPR000048 GO:0005515
Glsi02g2961 1563 SMART iq_5 809 831 IPR000048 GO:0005515
Glsi02g2961 1563 SMART iq_5 786 808 IPR000048 GO:0005515
Glsi02g2961 1563 FunFam Myosin heavy chain 304 359 - -
Glsi02g2961 1563 Gene3D Kinesin motor domain 116 714 IPR036961 -
Glsi02g2961 1563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 935 IPR027417 -
Glsi02g2961 1563 FunFam Myosin XI D 787 836 - -
Glsi02g2961 1563 Gene3D - 718 785 - -
Glsi02g2961 1563 FunFam Myosin 2 364 476 - -
Glsi02g2961 1563 Pfam IQ calmodulin-binding motif 884 904 IPR000048 GO:0005515
Glsi02g2961 1563 Pfam IQ calmodulin-binding motif 838 856 IPR000048 GO:0005515
Glsi02g2961 1563 Pfam IQ calmodulin-binding motif 813 831 IPR000048 GO:0005515
Glsi02g2961 1563 Pfam IQ calmodulin-binding motif 908 927 IPR000048 GO:0005515
Glsi02g2961 1563 Pfam IQ calmodulin-binding motif 789 807 IPR000048 GO:0005515
Glsi02g2961 1563 ProSiteProfiles IQ motif profile. 906 935 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2961 Glsi-ChrGlsi02 78367299 78385023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2961 50 1562 Myosins gene family AT5G43900 75.642 0.0 2367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2961 02 78367299 78385023 Glsi11g0805 11 5053191 5074658 CCT
Glsi02g2961 02 78367299 78385023 Glsi02g2961 02 78367299 78385023 ECH