Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2953 ATGAATGGGATGCAGGACAGAAAAGTTCACAATATTGGGAAGCCTTTTCCAGGATGCTTAGGAAGAATGGTAAACCTCTTTGATTTGACTGCTGGTGTAACTGGAAACAGGCTACTCAGTGATAAGCCGCACCACGATGCTTCTCCACTTTCAAGGAGTCAATCAGATGTTGCTAGGATTACAAGTCCTCCTTTTGGTGATCGGATGGAGGATAAACTGATTGTTTCTGACTTGAGGAGATCATCGTCACAGAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCAAAACAAGTTGATTCCAAGCACAGCCCACCAAATGTAGTTGCCAAACTAATGGGGCTTGAAACCCTCCCCTGGGAGGAGCCTAATTTAGCTGCACAAAGAAGCCATAGAAAAGATTATTCTCAACATATCTGTGGTCATTCAGGGATATCATCTAAACATTGGCATCTGGAAGATAGATTTATGGACAAGGAAATGCAGTGTGAAGTTCATCAGTGCACAGAAAAGATTGATTACCAAGATATTTATGAATTATGGCGGCAATCGCAGAGAACAAGCCATGCACTAGATAAGACACCAGAGAGAGGAAGGTGGACAGAAGATGTTAATGAGGAAAAAATGGCTCTCATTCGTCAGAAATTTATGGAAGCAAAACGTCTATCTACAGATGAGAGACTACGGCAGTCCAAGGAATTTGAAGAAGCCTTGGAAGTTTTAAGCTCCAATAAAGATCTGTTACTCAAGTTCTTGGATTCTCAAAATCTCTATGAACTTCAGTCTACTGCACAACCTGAGACAAAGCGAATAACTGTTCTTAAACCTTCAAAGATGTTTGACAATGACAAACCTGCTGTAAAGGGGAGGAAGAAGGATCAACAGATTAAAAAACCAGCAAATGCTGGTCAACCAGCAGTTTGGGACGTAAAGAACCCTGGATACTCTCCTCCGGCCACTCAGAAAATTGATGATTATCAACTTCAACATACTCGAATAGTGGTATTGAAGCCTAGCTCTGGGAAGCCACACGAGTCTAAGGCTGTAGTTTCTCCGGCATCTTCATCACCTCGTGATTTGCATAGTGGAAACTTTTATCAGCGGCCTGAAGATGGTGTCGTACCAGAATCAAGAAAAGTGGCAAAAGAGATCCCATGCCAAGTTGATGAAGACCTGTTGGGCCACCAAAGGGATGAAACTTTGTATTCTTCAGTCTTTTCCAATGGCTACAAGGGTGACGAGAGTTCATTTGACAGATCAGAAAATGATTATGCCCAGGGGAATTTTAGTGAATTGGAAGTTATGTCGCCATCTCCAAGGCATTCCTGGGACTATGTTAATCGCCGTAATCGCACTTACTCTCCATCATCCTTTAGCCATGTGTCTTGTTCTCCTGAGTCATCAGTTTGCAGAGAGGCGAAGAAACGACTTTCTGAAAGATGGGCCATGATAACATCAAAAAAGGATCCTCAAGAACAAAGGCATGTGCGCAGAAGCTCTTCCTTGGGTGAGATGCTTGCTCTTACAGATATGAAGAATTCTGTATCATCAGACATTGAGGGTAATAATAAAGAACAAAAACCAAGGGAATCTGTTTCCTGCAGTAGTAATAACAATGAAGAAATACAGGTGGATGATTCTCCTAAAAATCTACCCAGGTCTAAATCTGTCCCTGTATCTTCTACAGTCTATGATACTGGGTTAAGTGTTGAAGATTGTGATCCTGAGGCTGGCAAAGTACATGACTCCAAAGAGCAGACAAAGTCAAAAAGCATGAAATCATTTAAGGGGAAAGTCACAAGTCTGTTCTTCTCAAGGAATAAGAAATCAACTAAGGAAAAATCTTGTCTACCTCAATCTAAAGATGAATCCCAATCTACTGTCACTGAAACATCGATATCTCTGGCAAATTCGCCTGGAGTTCTTAGGGATGACATGTCTCAAAGCATCAGCAATGGGGGATTTGGAGAGCGTCCTCTTCCTGCTCAATATGAATTATCAGGCAAAACTTTTGCTGATTCAGTCTCCAAGGAACAAGGCATAATATCGCTGGAGCGTGGATTGACTGTGTCAAAACCCATGGTGCCTGGGATATCAAGTGAAAACCAAGATCAGCCGAGTCCTATCTCAGTTTTAGAACCTCTGTTTGGAGATGATAATGCAGCTCAGGGGTCCTTGGACGGTATGACGGCTGGTCACTTGGGAACACGGGTGCCCCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGGACCCTGTCATTGGATGACTCTTGTGCAGAGGCAGCAAGTCCTTATCCATTAAAACCCTTAACGGTTTCCCTAGACACCAAGGTAGAGGACATGCTTGATTTTGTCCAGAAGCTACTATCAGCGGCTGGACTCGATGAAAAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTAGAAAGTCCATTAGATCCATCATTAAGGGACAAATATGCAAATCTAAATGACAAGGAGCCTCTCCATGAAGCCAGACGAAGGCAGAGGAGATCAAATCAGAAGGTTATATTCGACTGTGTCAATGCTGCACTAATGGAAATCACTGGTTATGGCTCAGAAATATACTTCACCGGCAGGATGTGTAGTAGGAGTCACAGCAGGCTCCCAGAGGGTGCATCTCCCTTATTGGTGGACCTCATAGTGACCCAAATGAAGGAATTGATATTTAGTGAGGTGAGTTGTGTTTGGGGAGATTGTGGGGACAGCAACAGCCTGGTGGTAGAGAGGACTGTCAGGAAAGAAGTTGTGGGAAAAGGTTGGGTTGAGCTTATGGGATTGGAGACTGCTAATTTAGGAAGGGAAGTAGAAGGGAAGTTGCTAGAAGAGCTTGTGGAGGAGGCTGTAGTGGATTTGACGGGTAGGGCCCGATAA 2934 0.4315 MNGMQDRKVHNIGKPFPGCLGRMVNLFDLTAGVTGNRLLSDKPHHDASPLSRSQSDVARITSPPFGDRMEDKLIVSDLRRSSSQKKINGTPIKMLIDQEMSKQVDSKHSPPNVVAKLMGLETLPWEEPNLAAQRSHRKDYSQHICGHSGISSKHWHLEDRFMDKEMQCEVHQCTEKIDYQDIYELWRQSQRTSHALDKTPERGRWTEDVNEEKMALIRQKFMEAKRLSTDERLRQSKEFEEALEVLSSNKDLLLKFLDSQNLYELQSTAQPETKRITVLKPSKMFDNDKPAVKGRKKDQQIKKPANAGQPAVWDVKNPGYSPPATQKIDDYQLQHTRIVVLKPSSGKPHESKAVVSPASSSPRDLHSGNFYQRPEDGVVPESRKVAKEIPCQVDEDLLGHQRDETLYSSVFSNGYKGDESSFDRSENDYAQGNFSELEVMSPSPRHSWDYVNRRNRTYSPSSFSHVSCSPESSVCREAKKRLSERWAMITSKKDPQEQRHVRRSSSLGEMLALTDMKNSVSSDIEGNNKEQKPRESVSCSSNNNEEIQVDDSPKNLPRSKSVPVSSTVYDTGLSVEDCDPEAGKVHDSKEQTKSKSMKSFKGKVTSLFFSRNKKSTKEKSCLPQSKDESQSTVTETSISLANSPGVLRDDMSQSISNGGFGERPLPAQYELSGKTFADSVSKEQGIISLERGLTVSKPMVPGISSENQDQPSPISVLEPLFGDDNAAQGSLDGMTAGHLGTRVPLKSNLIDKSPPIESIARTLSLDDSCAEAASPYPLKPLTVSLDTKVEDMLDFVQKLLSAAGLDEKVQSDSFYSRWHSLESPLDPSLRDKYANLNDKEPLHEARRRQRRSNQKVIFDCVNAALMEITGYGSEIYFTGRMCSRSHSRLPEGASPLLVDLIVTQMKELIFSEVSCVWGDCGDSNSLVVERTVRKEVVGKGWVELMGLETANLGREVEGKLLEELVEEAVVDLTGRAR 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2953 977 MobiDBLite consensus disorder prediction 625 659 - -
Glsi02g2953 977 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Glsi02g2953 977 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 285 323 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 533 572 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 40 65 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 577 597 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 616 663 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 490 504 - -
Glsi02g2953 977 Pfam Domain of unknown function (DUF4378) 794 967 IPR025486 -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 285 302 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 344 379 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 490 598 - -
Glsi02g2953 977 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 975 - -
Glsi02g2953 977 MobiDBLite consensus disorder prediction 511 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2953 Glsi-ChrGlsi02 78315736 78320141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2953 1 973 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.433 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2953 02 78315736 78320141 Glsi11g0809 11 5105055 5109496 CCT
Glsi02g2953 02 78315736 78320141 Glsi02g2953 02 78315736 78320141 ECH