Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2934 ATGCCCTTCAACACAAGCTCCATCAAAACGTCATCAAATGGAGCATGGCAAGGCGACAATCCCTTGGACTACGCCTTCCCGCTCCTTATAGTTCAAACCACCTTAGTCCTGGTGGTTAGCCGTTCCATGGCTTTCCTTCTCAAACCTCTTCGCCAACCGAAAGTCGTTGCTGAGATTGTCGGTGGAATTCTGCTTGGCCCTTCAGCTTTTGGAAGGAACCAAACTTACATGAACCATATATTCCCATCATGGAGCACCCCAGTACTAGAATCCGTGGCCAGCATAGGCCTTCTGTTCTTCCTATTTCTTGTTGGTCTCGAATTGGATTTGAGCTCTATTGGCCGAAATGGTCGAAGAGCCTTTAGCATAGCAGCCGCTGGGATTTCGCTTCCTTTCTTTTGCGGCATCGCCCTAGCCATTTTGCTCCGAAAAACCGTTGATGGAGCTGACCGAGTTGGCTTCCCCCAGCTCCTTGTCTTCATGGGTGTTGCACTTTCCATCACCGCCTTCCCTGTGCTCGCTCGTATCTTAGCAGAGCTCAAACTCTTAACCACTCAACTGGGAGAGATGGCTATGGCCGCCGCCGCATTCAACGACGTCGCTGCGTGGATATTGCTCGCTCTCGCTGTGGCTCTTGCAGGTGAAGGTGTCGGTGTCGGTGGGCACCACAAGAGCCCGTTAGTGTCACTCTGGGTTCTTCTCTCGGGGGTTGCTTTCGTAATTTTCATGATGGTTGTTATCCGACCGGCAATGAGATGGGTCGCCCGGAGATGCTCCCCAGAGGTGGACGAATCTTATATATGCTTGACCTTAGCGGGAGTGATGGTTTCGGGGTTCGTGACAGATTTTATAGGGATCCATTCCATATTCGGAGCCTTCGTGTTCGGGTTGACGATTCCCAAAGAGGGAGACTTCGCGGAGAGATTGATAGAGAGAATCGAAGACTTTGTGTCGGGTCTGCTGCTTCCTCTTTACTTTGCTTCGAGTGGGTTGAGGACGAACGTGACCAAAATCCGAGGAGGGGAGGCGTGGGGTCTTTTGATTTTGGTGATAACGACAGCGTGCGCAGGAAAGATATTAGGAACTTTCGCGGCGGCGATGCTGTGTAGGATGCCGGCGAGGGAGTCGTTGACGCTAGGCGTCCTCATGAACACCAAAGGCCTGGTGGAGCTCATTGTACTAAACATTGGAAAGGAGAAAAAGGTTCTGAACGACGAGATGTTTGCCATTTTGGTTCTTATGGCTTTGGTCACCACCTTCATCACAACCCCAACAGTGATGGCTATCTATAAACCCGCTCGTTGCATCTCCCGAAGGCTAGGTGACCTCTCTTCCAACTCCAAGAAGCAGGTCGCCGACGAGCTCCGAGTCCTTGCCTGCGTCCACGGCCCCGGCAATGTGCCCTCCATCATCAATCTCATTGAGTCAACTCGTGGCACCAAGAATTCCCTCCTCAAGCTCTTCGTCATGCACCTTGTGGAGCTCACCGAACGTTCATCCTCCATCATCTTGGCTCGACGCGCCCGCAAGAATGGCTTCCCTTTCTTCGGCCGCTTCCACAGTAGCGACTGGCAAGACCGCCTCTCTCAGGCCTTTCGAGCCTATAGTCAACTGGGCCGAGTTTCGGTCCGGCCCACGTCGGCCGTATCTTCTTTGTCCACTATGCATGAGGATATTTGCCACGTGGCAGAGGAAAAGAGGGTGACCTTGATCATCTTGCCCTTTCACAAGCAGTGGAAGACGCAAGTCTACCAAGACAATGGGAGACACGAAGTAATGGAGAATGTGGGCCACGGTTGGAGGGGGGTTAACCAGAGGGTGCTCAAGAATGCTCCTTGCTCCGCGGCAGTACTTGTGGACCGAGGATATGGAAATGGGTCTCGGACTGCAGGCCCAGATCCCACTGTGGCCCAACAGATCTGCATTGTGTTCTTTGGTGGGCCCGATGATCGTGAGGCCTTGGAATTGGGCGGGAGAATGGCCGAGCATCCGGCAGTTAAGGTTACCGTTGTGAGGTTCGTTGAGAGAAATGGTTTGGAAGGTAACAGCGTCATGTTACGCCCCTCTCCAAGTAAGTGCCGCGAGCAAAGCTACAGCTTCTCCACCGCTATAATGAACCGCCAGAGAGAGCAGGAACTGGATGAAACTACGGTGGCGGAGTTCCGCAGCAAGTGGGCTGGAATGGCAGAGTACGCGGAGAAGGAGGCGAGCAACATAGAGGACGGGGTATTGACAATAGGGCGAAGTGGGGATTACGATCTGATTGTGATTGGGAAGGGGCGGTTTCCGTCTAGCATGGTGGCAAAATTGGCGGAGAGGCAAGCGGAGCACGCTGAGTTAGGTCCCATCGGAGACATTCTGGCATCGTCCGGAGAAGGGGTGGTGTCGTCGGTGCTGGTGATTCAGCAACACGATGTGGAACTTGCAGAGGAGGCTCCTGTGTCTAAGGTACAGGATGGGTACGCCAATTTCAAAGCCGACCAGTCGTCCAGTGGGCAAGGGATTACAGCATCAAACGACAACATAGTGTAA 2532 0.532 MPFNTSSIKTSSNGAWQGDNPLDYAFPLLIVQTTLVLVVSRSMAFLLKPLRQPKVVAEIVGGILLGPSAFGRNQTYMNHIFPSWSTPVLESVASIGLLFFLFLVGLELDLSSIGRNGRRAFSIAAAGISLPFFCGIALAILLRKTVDGADRVGFPQLLVFMGVALSITAFPVLARILAELKLLTTQLGEMAMAAAAFNDVAAWILLALAVALAGEGVGVGGHHKSPLVSLWVLLSGVAFVIFMMVVIRPAMRWVARRCSPEVDESYICLTLAGVMVSGFVTDFIGIHSIFGAFVFGLTIPKEGDFAERLIERIEDFVSGLLLPLYFASSGLRTNVTKIRGGEAWGLLILVITTACAGKILGTFAAAMLCRMPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALVTTFITTPTVMAIYKPARCISRRLGDLSSNSKKQVADELRVLACVHGPGNVPSIINLIESTRGTKNSLLKLFVMHLVELTERSSSIILARRARKNGFPFFGRFHSSDWQDRLSQAFRAYSQLGRVSVRPTSAVSSLSTMHEDICHVAEEKRVTLIILPFHKQWKTQVYQDNGRHEVMENVGHGWRGVNQRVLKNAPCSAAVLVDRGYGNGSRTAGPDPTVAQQICIVFFGGPDDREALELGGRMAEHPAVKVTVVRFVERNGLEGNSVMLRPSPSKCREQSYSFSTAIMNRQREQELDETTVAEFRSKWAGMAEYAEKEASNIEDGVLTIGRSGDYDLIVIGKGRFPSSMVAKLAERQAEHAELGPIGDILASSGEGVVSSVLVIQQHDVELAEEAPVSKVQDGYANFKADQSSSGQGITASNDNIV 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2934 843 PANTHER CATION/H + ANTIPORTER 8 805 - -
Glsi02g2934 843 Gene3D - 28 435 IPR038770 -
Glsi02g2934 843 Gene3D - 486 781 - -
Glsi02g2934 843 FunFam Cation/H(+) antiporter 15 28 437 - -
Glsi02g2934 843 Pfam Sodium/hydrogen exchanger family 35 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2934 Glsi-ChrGlsi02 78209117 78213065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2934 76 817 Antiporter Super Family AT3G53720 67.639 0.0 939