Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2927 ATGGCTACCTTTCTCAAGCCTGAAAATAGTTTGAAACGGGCTGAAGAGTTAATCAATGTCGGGCAGAAGCAGGCTGCTTTGCAAACTCTGCATGGCCTTATCACTTCAAAAAGATACAGAGCATGGCAGAAGACACTTGAAAGAATAATGTTCAAGTATGTAGAACTGTGTGTTGATATGCGGAAAGGGCGGTTTGCAAAGGATGGCCTCATTCAGTATCGAATCATATGTCAGCAAGTAAATGTCAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCATCTATCAACTGAAAAAGCTGAACAAGCTCGTAGTCAGGCACAAGAATTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCAGATAAAAGGCCAGAGGATTTGATGCTAAGCTATGTAAGTGGAGAAAAAGGAAAAGAGAGATCAGATCGGGAGCTTGTGACCCCATGGTTTAAATTTCTATGGGAAACATACAGGACAGTGCTTGAGATATTACGGAACAACTCAAAATTGGAAGCTCTATATGCTATGGCAGCACATCGGGCTTTCCAGTTTTGCAAACAATATAAACGAACAACAGAGTTCCGCAGACTCTGTGAAATCATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGATCAAAGGGACCGACCTGATCTTTCAGCTCCTGAAAGCTTGCAACTGTATCTAGACACAAGATTTGAGCAGCTGAAAATTGCTACTGAACTTGAACTCTGGCAAGAAGCCTTTCGATCAATTGAAGATATACATGGACTGATGAGCATGGTCAAGAAAACACCCAAGGCATCCTTGATGGTTGTTTACTATGCTAAGCTGACAGAAATATTTTGGATATCATCAAGCCATCTATATCATGCTTATGCATGGTTTAGGCTCTTTTTGCTACAGAAGAGTTTTAATAAGAATCTGAGTCAAAAGGATTTGCAATTGATAGCTTCGTCTGTTGTTTTGGCTGCACTTTCGGTGCCTCCCTATAATTACACCCGTGGTGCTTCTCATTTGGAATTGGAGCATGAAAAAGAGAGAAACTTGAGGATGGCTAATCTCATTGGTTTTAATCTTGAAAATAAACCTGAGAGCAGAGAAGCGCTTTCAAGATCATCCCTGCTCTCTGAACTGGTGTCCAAGGGTGTGATGTCTTGTGTAACTCAGGAAGTTAAAGACATTTACCATCTGTTGGAACATGAATTTCTCCCCTTAGATCTTGCATTAAAAGTTCAGCCCTTGTTAACCAAAATTTCCAAGTTAGGGGGTAAGCTTTCCACTGCTTCTTCTGTCCCAGAGGTACAGTTGTCTCAGTATGTCCCAACTCTGGAAAAACTTGCTACCTTGAGGTTGATACAGCAGGTGTCCAGTGTATACCAGACAATGAAGATTGATACCTTGTCTGGGATGATTCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCCGTGGATGCTGTTAAGCATGATTTTGTATCCATGAAAGTTGACCACATGAAAAGTGTTGTCATTTTCTCCAAGATGAATCTTGAGTCTGATGGCATAAGGGATCACTTGGCTATTTTTGCTGAACATTTAAATAAGGCAAGACAAACGATTCATCCTCCTGATAGGAAACCATCGAAAATTGGAGCTTTACTTCCCACTTTGACAGAAGTTGTTGCCAAGGAGCACAAGAGGCTTCTTGCCCGAAAATCAATTATTGAGAAGCGGAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAACGTGAGGAGGAGTCAAAGAGATTAAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCACTGAGTATGAGCAGAGGAAGAATCAGAGAATACTCAGGGAAATAGAGGAAAGGGAAATGGAAGAAGCTCAAGCCTTGCTTCAGGAAGCTGAAAAGCGAATTAAAAAGAAAGGAAAGAAGCCAATTATAGAGGGGGAAAAAATGACCAAACAAACCTTGATGGAGTTGACTTTGACTGAGCAACTCCGTGAAAGGCAGGAAATGGAAAAGAAACTGCAAAAATTGGCCAAAACCATGGATTATTTGGAAAGAGCCAAAAGGGAAGAGGCTGCTCCCCTAATTGAAGCTGCATATCAAAAGCGCCTAGTCGAAGAGACGACTTTTCATGCGCGTGAGCAACAGCAAGAGGTTGAGCTTAGCAAACAGCGCCACGAGGGAGATCTAAAGGAGAAGGAGAGACTGGCTTGTATGATAGGAAATAAAGAGATTTATCAAGAGAGAGTTGTCAGTCATCGACAAGCCGAATTTAATAGATTAAGAAGGGAAAGAGAGGAGCGAATCTCTAGGATTTTGCAGTCAAGGAGAGAGGAGCGACAAAAGATGAGGAAGTTGAAGTTTTATCTTAAGTTAGAAGAAGAAAGACAACAAAAATTGCATGAGGAGGAGGAAGCTCGAAAGCATGAAGAGGCTGAGAGGCGAAGGAAGGAAGAGGCTGAACGGTTAGCAAAGTTGGCTGAGATAGCTGAAAAGCAGAGGCAAAGAGAGAGGGAACTTGACGAAAAGGAAAGACAAAGGAAAGAAGCACTGTTGGGCAGATCAACTGAAGCAGCAGCTTTGAAGCCTTCTGAACCTCCCCGTCCATTGGATATAGGATCTACTGCTCCTGCAGCAGCACCCACCTCAACCCCAGGGAAGTATGTTCCTAAGTTTCGACGCGAGAGATCTGAAGGTGCAGCCCCTATTCCTCCTCCGGAATCTGATCGTTGGACCAGCACCAGCAGCCGGCAGGATGGTGATAGGTGGCGTAGTGATGACCGCAGACCTGCATTTGGTGCTGGTGGGGGTTCATCATGGTCATCGACCAGGAATCGCTGA 2862 0.4287 MATFLKPENSLKRAEELINVGQKQAALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQELEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMAAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSIEDIHGLMSMVKKTPKASLMVVYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPYNYTRGASHLELEHEKERNLRMANLIGFNLENKPESREALSRSSLLSELVSKGVMSCVTQEVKDIYHLLEHEFLPLDLALKVQPLLTKISKLGGKLSTASSVPEVQLSQYVPTLEKLATLRLIQQVSSVYQTMKIDTLSGMIPFFDFSVVEKISVDAVKHDFVSMKVDHMKSVVIFSKMNLESDGIRDHLAIFAEHLNKARQTIHPPDRKPSKIGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEETTFHAREQQQEVELSKQRHEGDLKEKERLACMIGNKEIYQERVVSHRQAEFNRLRREREERISRILQSRREERQKMRKLKFYLKLEEERQQKLHEEEEARKHEEAERRRKEEAERLAKLAEIAEKQRQRERELDEKERQRKEALLGRSTEAAALKPSEPPRPLDIGSTAPAAAPTSTPGKYVPKFRRERSEGAAPIPPPESDRWTSTSSRQDGDRWRSDDRRPAFGAGGGSSWSSTRNR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2927 953 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Glsi02g2927 953 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Glsi02g2927 953 Coils Coil 615 649 - -
Glsi02g2927 953 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 936 IPR027512 GO:0005852
Glsi02g2927 953 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Glsi02g2927 953 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Glsi02g2927 953 Gene3D - 268 342 - -
Glsi02g2927 953 Gene3D - 351 493 - -
Glsi02g2927 953 MobiDBLite consensus disorder prediction 803 859 - -
Glsi02g2927 953 MobiDBLite consensus disorder prediction 803 953 - -
Glsi02g2927 953 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 938 IPR027512 GO:0005852
Glsi02g2927 953 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Glsi02g2927 953 Coils Coil 796 856 - -
Glsi02g2927 953 Coils Coil 561 602 - -
Glsi02g2927 953 Coils Coil 93 120 - -
Glsi02g2927 953 Coils Coil 667 697 - -
Glsi02g2927 953 Gene3D UVR domain 217 267 - -
Glsi02g2927 953 MobiDBLite consensus disorder prediction 921 936 - -
Glsi02g2927 953 Pfam PCI domain 373 510 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2927 Glsi-ChrGlsi02 78175197 78183035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2927 1 949 Eukaryotic Initiation Factors Gene Family AT4G11420 71.872 0.0 1316