Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2922 ATGGCTTTCTTCTCAGGAATTGGTCGCCTTCTTCGCGAGTCCTCTGCTACTTCTTCAGTCCTCTATTCGCAATTCACTTCGGTTCGTCTTAGTTCAACTCTCACATCCCCGAAACTTTTCATCAGTGGTCTTTCAAGACTGACAACCGATGAAAAACTAAAGGAAGCATTTGCTACTTTTGGGCAGCTGGTCGAAGCTAAGGTCATAACTGATAGAGTCTCTGGAAGATCAAAAGGATTTGGTTTTGTAACTTACAGAACCATAGAAGAAGCTGAAAAGGCCAAAGAAGGAATGAATGCCAAGTTTTTGGATGGATGGGTTATTTTTGTCGACCCTGCCAAACCGAGGGAACCCAAACCTCCTCCGCAATCACAGTCTCAGCCCTCTGAAACAGGGTTCACAGTTAACAAGACGATTGGATGGTGTGGTTGA 432 0.4468 MAFFSGIGRLLRESSATSSVLYSQFTSVRLSSTLTSPKLFISGLSRLTTDEKLKEAFATFGQLVEAKVITDRVSGRSKGFGFVTYRTIEEAEKAKEGMNAKFLDGWVIFVDPAKPREPKPPPQSQSQPSETGFTVNKTIGWCG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2922 143 MobiDBLite consensus disorder prediction 113 135 - -
Glsi02g2922 143 Gene3D - 13 127 IPR012677 -
Glsi02g2922 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Glsi02g2922 143 FunFam RNA binding protein 24 137 - -
Glsi02g2922 143 PANTHER NUCLEOLAR PROTEIN 8 19 142 - -
Glsi02g2922 143 SMART rrm1_1 38 111 IPR000504 GO:0003723
Glsi02g2922 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Glsi02g2922 143 SUPERFAMILY RNA-binding domain, RBD 36 133 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2922 Glsi-ChrGlsi02 78145386 78148309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2922 39 119 Eukaryotic Initiation Factors Gene Family AT3G16380 39.506 5.82e-14 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2922 02 78145386 78148309 Glsi02g2922 02 78145386 78148309 ECH