Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2913 ATGGTTAGAGTCAGTGTCTTGAATGATGCATTAAAGAGCATGTACAATGCTGAAAAGCGGGGAAAGCGGCAAGTCATGATAAGACCTTCATCAAAGGTTATTATCAAGTTTCTTCTGGTCATGCAGAAGCATGGATACATTGGCGAGTTTGAGTATGTTGATGATCATAGAGCTGGAAAAATAGTTGTTGAACTTAACGGAAGGTTGAACAAGTGTGGAGTTATCAGCCCTCGTTTTGACGTGGGCGTCAAAGAAATTGAACCATGGACTGCTAGATTGCTTCCTTCCAGACAGTTTGGATATATTGTTCTGACAACATCTGCGGGCATCATGGACCACGAAGAAGCTAGAAGGAAAAATGTTGGTGGAAAGGTTCTTGGCTTTTTTACTAGGGAGACCTGCGATTATGGAAATACTCATATTTCCTTTGTTTTAGAAGTTTTTGCTCTGAGGACCGTTTTGTTAGTATTGCTTTAA 477 0.4046 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFTRETCDYGNTHISFVLEVFALRTVLLVLL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2913 158 SUPERFAMILY Ribosomal protein S8 4 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Glsi02g2913 158 FunFam 40S ribosomal protein S15a 70 130 - -
Glsi02g2913 158 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi02g2913 158 Gene3D - 70 129 - -
Glsi02g2913 158 Gene3D - 1 69 - -
Glsi02g2913 158 FunFam 40S ribosomal protein S15a 1 69 - -
Glsi02g2913 158 Pfam Ribosomal protein S8 7 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi02g2913 158 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi02g2913 158 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2913 Glsi-ChrGlsi02 78111293 78111972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2913 1 129 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.899 2.27e-91 259