Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2909 ATGGACAACCAGACAGCACATTGGTTTGACAGAGCGAAGCCATTCTTAGCTGTCGTATTCTTGCAATTTGGATTCGCAGGTATGGATGTTCTATCAAAGGCTGCACTGAACAAGGGGATGAGCAATTACGTACTAGTTGTCTACCGCCATGCTGTTGCCTTTATCGTAATGACCCCTTTTGCAGTGATCCTGGACAAGAAAGTAAGGCCCAAGATGACACTCTCAATCTTCATGAAGATAGTGGCGCTAGGCATGCTAGAGCCAGTTATTGACCAGAATTTGTATTTTCTGGGAATGAAGTACACAACAGCAACGTTTGCCGCTGCAATGACCAATATGCTTCCCGCCATTACCTTCCTGATGGCTTACATTCTTAGGATCGAGAAGATTAAAATCAAAAGCATACGCAGCCAAGCAAAGGTGGTTGGCACTCTAGCAACAGTTGCAGGAGCCATGGTCATGACATTATTAAAAGGCCCGGTGCTTGAAATTTTTGGGGCGCATGGAAGCACTAACCACGACCAGCAAAGTGGCGGGGTAAATATTCAACATGCAATAAAAGGATCGGTGATGATCACGATTGGGTGCTTTAGTTGGGCTTGTTTCATGATTCTCCAAGCAATTACCCTTGAAGCCTATCCTGCTGAGCTATCCCTTACAGCATGGATATGCCTGCTGGGAACAGTTGAAGGCGGCATGGTTGCCTTGGCCATGGAAAGGTGCAACCCCTCAATTTGGTCACTGCATTGGGATATGAAACTGCTGGCCGCTGTCTACAGTGGCGTAGTCTGCTCAGGACTGACTTACTACATCCAAGGTGTAGTGATGAAAGTTAGAGGCCCCGTCTTTGTGACAGCGTTTAGCCCCCTGTGCATGGTATTTGTAGCTGTCATGAGCTCCTTCATTCTGTTTGAGCAACTGTACCTCGGAAGGTTGATCGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTGGTTTGGGGTAAAAGCAAAGATTACAATTCACAGACTCCAATTGCCACAGAGCACTCAGTGCCAGCTACGCTAATTGCAGATGAGGGTAATGCCACAAAGGACAATTCTAATCTCGAGGTCATCACTATCAATAATTTTGAAGCAGGAATCATAAATATCTCGGAGTCGGAGCATTCAGCTACAAATCACCCTCCAAATGCCTAA 1179 0.4623 MDNQTAHWFDRAKPFLAVVFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHAVAFIVMTPFAVILDKKVRPKMTLSIFMKIVALGMLEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFLMAYILRIEKIKIKSIRSQAKVVGTLATVAGAMVMTLLKGPVLEIFGAHGSTNHDQQSGGVNIQHAIKGSVMITIGCFSWACFMILQAITLEAYPAELSLTAWICLLGTVEGGMVALAMERCNPSIWSLHWDMKLLAAVYSGVVCSGLTYYIQGVVMKVRGPVFVTAFSPLCMVFVAVMSSFILFEQLYLGRLIGAIVIVLGLYLVVWGKSKDYNSQTPIATEHSVPATLIADEGNATKDNSNLEVITINNFEAGIINISESEHSATNHPPNA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2909 392 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Glsi02g2909 392 Pfam EamA-like transporter family 18 154 IPR000620 GO:0016020
Glsi02g2909 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Glsi02g2909 392 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Glsi02g2909 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2909 Glsi-ChrGlsi02 78084785 78086987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2909 10 370 Nodulin-like Gene Family AT2G37460 65.840 7.49e-176 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2909 02 78084785 78086987 Glsi02g2909 02 78084785 78086987 ECH