Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2908 ATGAGAACAGAGCCGAGGAAAATATCCAAGTCTTCGTGGCCGAAATTAGTGGTGAGAAAGTGGCTGAATATAAAGAGTGGAGCCGACAATTTTCACTCGGACTACTCTGTAATGGGTACAGTCAGATCTAAGAGCGAGAGAAGGAAGAGCTGCTCAGACCAAGACTGTTACGACGTCGTAAAGGACGATTTCTCAGAGGGATGGTCGGTGGAATCTACGAACGGAACGAAACCTTGGGTACGAGAGGAGGCACCGCCTGTGACGGATGCTCTCAATCTTAGGATGTTCGTGGGAACATGGAACCTAGGAGGGAAGTCACCCAACGAAAACCTCAACTTGATGGAATGGCTCAAGTCTCCTTCGCCGGCAGACGTATACGTCATTGGGTTCCAAGAAATCGTGCCTCTGAATGCAGGGAACGTGCTTGGTCCGGAGGACAGTGTCCCGGCGGCCAAGTGGCTTTCTCTTATTCGTCAAGCCTTGAACGCCAATGAGTTTGACCACCGCCATGAGAATTCTCCGCATTACAGCGCTGGTGAACAGGATCAACAAGGAAGCCTGAACCCTAGGTTCAGTTTCTCGGACTTCCTTTCTTTAGAGGACGAGTTGGGCAGTGAAGAAATTGGAAGACTTCTTCCTGTTAACTCAAATGTAAGTTGTAGCGGTGAAAGCTCTCCTTCTTCGAGTGGGAGGCATTGCAGCCTTCCTCAGCAAGGACGCTATTGCCTAGCAGCAAGTAAGCAAATGGTAGGTGTCTTCTTGTGCGTATGGGTGCGTGCAGACCTCTGTAAACACCTTAGCCATTTGAAGGTGTCGTGCGTGGGTAGAGGCATCATGGGCTATCTCGGAAATAAGGGTTCTATATCAATTAGCGTGACATTATACCACACAACGTTTTGCTTCGTATGTACCCACTTAACATCCGGAGAGAGAGACGGTGACGAGGTGCGAAGAAACTTGGATGTCTCGGAAATCTTGAAGAAAACTAAATTTTCTCACTCATTCAAACCTACAGGTGGTCTTCAACTCCCTCCTGAAACCATATTGCAACATGATAATATCATTTGGCTTGGGGATTTGAATTATCGGCTAGCTTCTGCCTGTGGTGATACATACGATCTATTAAAGAAGAATGATTGGCAGGCACTTTTAGAGAAGGATCAGCTAAGGAAAGAGCAGAGAACTGGTCGTGTATTTGAAGGGTGGAACGAAGGAAGGATACGTTTTGCTCCTACTTACAAATACTTAGCCAATTCTGACCACTATGTTGTCCAAACCTCCAAGTCCAAGGAAAAACGCCGCACTCCTGCTTGGTGCGATCGAATTCTGTGGAAAGGGGAAGGCCTAAAGCAGATGTGGTATGTGCGCGGAGAATCCAAATTCTCAGACCATAGGCCTGTGTGTTCACAATTCTCAGTTAAAGTGGACTTGACAAGCAAGAAGCTCACTCCCAATGCTGCTGCTGTCTTGTCGTCGAGTTGCCTGGCCAAGGTCCAGGCAGAGGAACAGCTCTTGTTACTAACCAGGGCGCAGAGTTGCATAGCCAGCGTGCCCAGCAGATGCAGAAGAGTGAATCAGAAGCATGATGTGCCTGGTTCTCTGGGCATTTCTTGTCATGAGTGTTCAAATGCTTCTTCAAACCCCCAGCCGCCCTTGTTCGCCTATAATAGTATGCCACGTTCAAGATTCGACATCCTGATGAAAGCTGGTGCACAGGCCCACGGTGAACCTGCGATGACTCCAACTTCATCTGTTGCTGCCGGATATAAAATATTTGATCATCTCCACGTGAACGGTTCTGATAACGTCTCATTCAATGCGATCGTGTTACTCCTCCTCAACAAATCCCTCCAAATCTGCCCTCCCAACTTGTTAGATCTCGCCGCAAACCACGTCCGTACTCTCGCCGGCGTGTTTTCGGAAAGATTATTGAGTCTGCGGACAATAAATACATTAGGGATCAAAAGCGATGGCAATGTTGTTGTTAAAGACCAAGATTGCAAGAATTGTCTCATTAGCAAGGAACTTGCGGTGAAGAAGGGAGATGGTTATTCTTCTTTCCACAATCAGGAATTTTGGATGGGAAAGAGTACTGGGTGTTTGAATGATGGTGAAATGACTTATGACAGTTCTTCTAGAATGGAGTCCAAGAGATCTCATCAGTGGTTCATGGATGGCCCTGAAGTGGATATGTTTCCCAACAAGAAACAAGCAGTAGAGATTCCAACCAATAATTTATTATCGGTGTTTAGCTCCAATATTTCAGCATGGGGAAATTCCTCAAGCTTCCACTCATTCAATGGTAATTTTACTGAACGGTTACTTGACCCTGATGCTGCAACAAGGACTATGAGTTATGAGAACAGAAATATTCCCTCTCCCAGTGCAGATAAGTTGAATGTGGCAAGAAAGGATGATGCAGAACCCTTTGGGAGTGATTCCTTATTCGGTTTATCTATATCCCATACAATAGACGATCCTGGATCAGGCCTTAACTATGGTGGAATTAGGAAAGTTAAAGTTAGTGAGGTGAAGGAATCTGAGAATGTCATGTCAGTTCCTACAGATCATGCCTATGACAGGGGAGTTAACAACACCATGTCAAATTCCCATGCATACAAGGAGGTCGCTAATCCCATATCAACGAGTCTTACTTACAGCAAGGGGGAAGACAATATTGTGTCCATGGATGACACTTATGGCAGGATGTACAACAATTTCATTTCACTGTGCCAATCTTATAACAAGGGAAATGACAGCTTATCTGTAGGTCAAAATTACAAAGAGATTTGTAATACAATATCGATGGACCAAGCATTTAGCAAGGAGGATAATAATATGATATCTATTGCTCAAGCTTATAACAAGGTAGATGACAATTCTTTCTCAAGGGACAGCATATTTAATAAGGGGGAGGATGACACCATATCAGTGGGTCACACCTACCACAAGGGTGGAAATGATAAGCTATTGGTTGCTCATTCTTATAATAGAGGAGAAAGCACTATCATATCCTTTGGCGGCTGTGATGATGATGACACAACTTCCTCTGTTAGACTCATGTCCAGCTATGAACTGTTGATGGGTCAACCACCTATACAGAATTCAGAAGCTATGAATGAGAGAGAGTTGGTCATTTCTAATTCTGATTCACTTTTAACCACAGCCCTGACATCTGTGTCTGGACATATAAATGTTTCCAAGACAAAAGAGGATCCTAAAATGTCAAAGAAGGTTCCTTCAAACAACTTCCCTTCTAATGTCAGAAGTTTGCTGTCCACTGGTATGCTGGATGGAGTCCCTGTAAAGTATATGGCCTGGTCACGGGAGGAACTTCGAGGTGTCATAAAAGGTGCTGGGTATTTATGCAGCTGCCAGTCATGTAATTATGCCAAGGTTATTAATGCATATGAGTTTGAGCGACATGCTGGTCGCAAGACAAAACACCCTAATAATCACATTTACTTTGAGAATGGAAAGACTATATATGGGATTGTCCAAGAGCTCAGGAGCACTCCACAAAATATGTTATTTGAAGTTATTCAGACAATAACTGGTTCACCTATCAATCAGAAATCCTTCCGCATTTGGAAAGAATCCTTTTTAGCAGCAACACGTGAACTTCAGCGCATATATGGAAATGATGAAGTGAAGCAATTGTCGTAA 3666 0.4433 MRTEPRKISKSSWPKLVVRKWLNIKSGADNFHSDYSVMGTVRSKSERRKSCSDQDCYDVVKDDFSEGWSVESTNGTKPWVREEAPPVTDALNLRMFVGTWNLGGKSPNENLNLMEWLKSPSPADVYVIGFQEIVPLNAGNVLGPEDSVPAAKWLSLIRQALNANEFDHRHENSPHYSAGEQDQQGSLNPRFSFSDFLSLEDELGSEEIGRLLPVNSNVSCSGESSPSSSGRHCSLPQQGRYCLAASKQMVGVFLCVWVRADLCKHLSHLKVSCVGRGIMGYLGNKGSISISVTLYHTTFCFVCTHLTSGERDGDEVRRNLDVSEILKKTKFSHSFKPTGGLQLPPETILQHDNIIWLGDLNYRLASACGDTYDLLKKNDWQALLEKDQLRKEQRTGRVFEGWNEGRIRFAPTYKYLANSDHYVVQTSKSKEKRRTPAWCDRILWKGEGLKQMWYVRGESKFSDHRPVCSQFSVKVDLTSKKLTPNAAAVLSSSCLAKVQAEEQLLLLTRAQSCIASVPSRCRRVNQKHDVPGSLGISCHECSNASSNPQPPLFAYNSMPRSRFDILMKAGAQAHGEPAMTPTSSVAAGYKIFDHLHVNGSDNVSFNAIVLLLLNKSLQICPPNLLDLAANHVRTLAGVFSERLLSLRTINTLGIKSDGNVVVKDQDCKNCLISKELAVKKGDGYSSFHNQEFWMGKSTGCLNDGEMTYDSSSRMESKRSHQWFMDGPEVDMFPNKKQAVEIPTNNLLSVFSSNISAWGNSSSFHSFNGNFTERLLDPDAATRTMSYENRNIPSPSADKLNVARKDDAEPFGSDSLFGLSISHTIDDPGSGLNYGGIRKVKVSEVKESENVMSVPTDHAYDRGVNNTMSNSHAYKEVANPISTSLTYSKGEDNIVSMDDTYGRMYNNFISLCQSYNKGNDSLSVGQNYKEICNTISMDQAFSKEDNNMISIAQAYNKVDDNSFSRDSIFNKGEDDTISVGHTYHKGGNDKLLVAHSYNRGESTIISFGGCDDDDTTSSVRLMSSYELLMGQPPIQNSEAMNERELVISNSDSLLTTALTSVSGHINVSKTKEDPKMSKKVPSNNFPSNVRSLLSTGMLDGVPVKYMAWSREELRGVIKGAGYLCSCQSCNYAKVINAYEFERHAGRKTKHPNNHIYFENGKTIYGIVQELRSTPQNMLFEVIQTITGSPINQKSFRIWKESFLAATRELQRIYGNDEVKQLS 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2908 1221 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 492 IPR045849 GO:0004445
Glsi02g2908 1221 SUPERFAMILY DNase I-like 81 480 IPR036691 -
Glsi02g2908 1221 Pfam Tify domain binding domain 1114 1169 IPR032308 -
Glsi02g2908 1221 SMART i5p_5 91 479 IPR000300 GO:0016791|GO:0046856
Glsi02g2908 1221 Gene3D Endonuclease/exonuclease/phosphatase 73 503 IPR036691 -
Glsi02g2908 1221 Pfam Endonuclease/Exonuclease/phosphatase family 98 464 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2908 Glsi-ChrGlsi02 78075168 78083913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2908 1065 1201 PHD Transcription Factor Family AT3G53680 53.623 1.68e-41 163