Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2904 ATGAAGGCACGTCATTACCCGCAAGCCACATGCATCACAAAAACCGGTTGCGCCAAAGCCGTGACTTCGGACAAAGGCAGGGAGGGAGAAGGAGAATCGAACACTGAATCAGTCATGGCCATAGCCGCCGCCATTTCTGTTCCTCTCACATCGTCAACCCGCCGCTCCATCGCCTCCGCTAGTCTCCTACGGCCTTCTTCGACTTCCTCATCTACTTTCCTTTCCAATTTCCTCAGACCTCAACGTTCTGTAAAATACCCTAATTCTCGCATCATAGCTTCTTCAATGAGCATTGAAACCCCTGTGAAAACCTCGTCGACTTCATTTCTAGAACGAAAGGAGAGTGGCTTTCTCCATTTTGCTAAGTATCATGGCGTGGGCAATGACTTCGTTTTGGTTGACAACAGAGACTCTCTAGAGCCCAGGATCAGTCCAGAGAAAGCTGTGCGACTGTGTGATCGTAACTTTGGTATTGGTGCTGATGGAGTTATCTTTGTCATGCCAGGCACAAATGGCACTGACTATACCATGAGAATCTTTAATTCTGATGGTAGTGAGCCGGAGATGTGTGGTAATGGAATGCGATGCTTTGCCAAATTCGTTGCTCAGCTTGAGAACTTACATGGGAGGCATAGTTTTACCGTACATACTGGTGCTGGCCTAATTGTTCCAGAAATTTTTGAGGACGGAAACGTCAGAGTTAACATGGGGGAACCAATTCTTAAAGCACCAGATGTGCCCACTAAATTACTTGCCAATAAGGATCATTCTGTTGTGAAGTCAGAGCTAGAAGTAGATGGTGTTATATGGAATGTCACATGTGTTAGTATGGGAAATCCACATTGTGTAACTTTCAGTACAAAAGAAAACCAGAATTTATTGGTTGATGATTTGAACCTACCAGAAATTGGCCCAAAATTTGAACATCATGAGGTTTTCCCTGCACGAACTAACACAGAGTTTGTACAAGTTCTGTCTAATCATCACCTGAAGATGCGTGTTTGGGAGCGTGGAGCAGGAGCAACTTTAGCCTGTGGAACTGGAGCTTGTGCTGTAGTTGTTGCAGCGGTTCTCGAGGGTCGTGCTGGGAGGAATTGCACGGTTGATCTACCTGGAGGGCCTTTGCAGATTGAGTGGAGGGAGGAAAACAATCATGTCTATATGACGGGCCCAGCTGAAGCAGTTTATTACGGATCCCTCCCCCTTTGA 1209 0.4624 MKARHYPQATCITKTGCAKAVTSDKGREGEGESNTESVMAIAAAISVPLTSSTRRSIASASLLRPSSTSSSTFLSNFLRPQRSVKYPNSRIIASSMSIETPVKTSSTSFLERKESGFLHFAKYHGVGNDFVLVDNRDSLEPRISPEKAVRLCDRNFGIGADGVIFVMPGTNGTDYTMRIFNSDGSEPEMCGNGMRCFAKFVAQLENLHGRHSFTVHTGAGLIVPEIFEDGNVRVNMGEPILKAPDVPTKLLANKDHSVVKSELEVDGVIWNVTCVSMGNPHCVTFSTKENQNLLVDDLNLPEIGPKFEHHEVFPARTNTEFVQVLSNHHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWREENNHVYMTGPAEAVYYGSLPL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2904 402 FunFam Diaminopimelate epimerase, chloroplastic 92 241 - -
Glsi02g2904 402 SUPERFAMILY Diaminopimelate epimerase-like 118 247 - -
Glsi02g2904 402 Pfam Diaminopimelate epimerase 274 394 IPR001653 GO:0008837|GO:0009089
Glsi02g2904 402 Pfam Diaminopimelate epimerase 120 240 IPR001653 GO:0008837|GO:0009089
Glsi02g2904 402 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 242 392 - -
Glsi02g2904 402 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 102 401 IPR001653 GO:0008837|GO:0009089
Glsi02g2904 402 ProSitePatterns Diaminopimelate epimerase signature. 181 195 IPR018510 GO:0005737|GO:0008837|GO:0009089
Glsi02g2904 402 NCBIfam diaminopimelate epimerase 119 400 IPR001653 GO:0008837|GO:0009089
Glsi02g2904 402 FunFam Diaminopimelate epimerase chloroplastic 242 389 - -
Glsi02g2904 402 SUPERFAMILY Diaminopimelate epimerase-like 262 400 - -
Glsi02g2904 402 Hamap Diaminopimelate epimerase [dapF]. 118 402 IPR001653 GO:0008837|GO:0009089
Glsi02g2904 402 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 101 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2904 Glsi-ChrGlsi02 78041875 78046915 Dispersed/Wgd