LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g2894	ATGACAAGCATCTTCTTTCAGCCCGAAACGCCGTCATTCTCCATTTCGAGCATCGACCGTTGCATCGAGGAAGCCCAAGCCCTGATTCTGAAATGGAACCCAGAGACTTCAGAGTACGCCAGAGTTACTTCCCTCTTCATCGAATACAAAACCGAGGCCATGCACTACATCAAATGCGTTAACCAACTCCACAAAGCCATGCATCTCTTGATCTCTCAGAATCCACCTTCCTCTGAGAAACTCAGTCTCGCAAACAACTTAATGCAGATGGCTATGAAGAGGCTCCAAAAGGAGTTCTACCAAATTTTATCCATCAACGGGGCCCACTTAGACCCCAAATCCGTCTCCTCCACTAGATCTTCTCTTTCTCATGCCACCTCTCTCCATTCCGGCACATCCGATTACGATGACGATGCTACTGCACCAGACGATGACGTTCGAGCAATAGGTGATTCAATCTCCGAATCCGAACAGGTCTCTTCCGTTGCCATGATGGATCTTAGGTCCATAGCCGAGTGTATGATCTCATGTGGTTACGCAAAAGAATGCGTGAGCGTGTACAAAATTATCAGAAAATCCATCATCGACGAAGGCATTTATCGATTAAACATAGAGAAGATGAGCTCTTCTCGCATAAATAAGATGGACTGGCAAGTTCTTGAGCTGAAAATCAAGACTTGGCTAGAGGCAGTGAAGATTTCAGTCAGGACGCTCTTCAATGGAGAGAGGATCCTATGCGACTATGTCTTCGCCACTTCAGAATCCATCAGAGAATCTTGCTTCACCGACATTTCCAGAGACGGAGCCACTCTTCTATTCGCATTCCCCGAACTCATCTCCAAAACTAAGAAACCGCTGCCGGAGAAGATGTTTCGGGTGCTTGACATGTACAATGCAATAATTGCATTGTTGCCGGAGATTCAATCCATATTCTCTTTCAAGTCCACCTCCGGAATTACATCTCAAGTCCTGCTCCGACTCAGCAATTCCGTACGAACGATGCTTTCAGAATTCGAATACAAGATCCAAAAGGACTCATCCAAATCGCGGTTAAGAGAAGGCGGAGTCCACCCACTGACAACGGAGATTCAATCCATATTCTCTTTCAAGTCCACCTCCGGAATTACATCTCAAGTCCTGCTCCGACTCAGCAATTCCGTACGAACGATGCTTTCACAATTCGAATACAAGATCCAAAAGGACTCATCCAAATCGCGATTCGATGACACATCGGCGGCGACTGCGTTCTCCGCGAAGATAGCTTGGCTAATTCTCGTTCTTCTCTGTAAGCTCGACAGCAAGGCAAAGCATTACAAGGACGTTTCCTCATCGTACATGTTTCTAGCAAACAATCTCCAGCACGTGATAGACGCAGCGCGAAACTCGAACTTGCAATACGTGCTGGGTGACGAGTGGATCGTGAAGCACGAAGCGAAGATGAAAGGGTTGGTAATGAAGTACGAGAAGGTGGCGTGGGGCGAAGTGTTTTCGTGCTTGCCGGAAAATCCAAAGGCAGTGATATCGACGGAAGAGGCGAAGGAAATATTCAGGAACTTCAGCTTCTATTTCGAGGAAGCACATCGGAAACAGAATTCATTAAGGGTACCGGACCGGACACTACGTAACGAGTTAAAAGCGTCTATAGCGAGAAAGGTAGTTCCGATTTATCGCGAGTTCTACAATGCGCACAGTGTGGGACCAGTGAGAGACATGACATTGTATGTCACATTTAGCCCAGACGATGTTGAAGATTACCTGGCGAACCTGTTCTTTGAGGAGGGAAGCTCCGACAGCGTAACGGGGTCGTCGTCATTGTCTTCGATAACGTCATCTTCTCACCAGCAGCATTCGCTGGCGCAGAGTTTGGAGCACCGAACCGATTAA	1884	0.4724	MTSIFFQPETPSFSISSIDRCIEEAQALILKWNPETSEYARVTSLFIEYKTEAMHYIKCVNQLHKAMHLLISQNPPSSEKLSLANNLMQMAMKRLQKEFYQILSINGAHLDPKSVSSTRSSLSHATSLHSGTSDYDDDATAPDDDVRAIGDSISESEQVSSVAMMDLRSIAECMISCGYAKECVSVYKIIRKSIIDEGIYRLNIEKMSSSRINKMDWQVLELKIKTWLEAVKISVRTLFNGERILCDYVFATSESIRESCFTDISRDGATLLFAFPELISKTKKPLPEKMFRVLDMYNAIIALLPEIQSIFSFKSTSGITSQVLLRLSNSVRTMLSEFEYKIQKDSSKSRLREGGVHPLTTEIQSIFSFKSTSGITSQVLLRLSNSVRTMLSQFEYKIQKDSSKSRFDDTSAATAFSAKIAWLILVLLCKLDSKAKHYKDVSSSYMFLANNLQHVIDAARNSNLQYVLGDEWIVKHEAKMKGLVMKYEKVAWGEVFSCLPENPKAVISTEEAKEIFRNFSFYFEEAHRKQNSLRVPDRTLRNELKASIARKVVPIYREFYNAHSVGPVRDMTLYVTFSPDDVEDYLANLFFEEGSSDSVTGSSSLSSITSSSHQQHSLAQSLEHRTD	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g2894	627	Gene3D	Exocyst complex component Exo70	43	598	-	-
	Glsi02g2894	627	Pfam	Exo70 exocyst complex subunit	226	587	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Glsi02g2894	627	SUPERFAMILY	Cullin repeat-like	22	590	IPR016159	-
	Glsi02g2894	627	MobiDBLite	consensus disorder prediction	599	627	-	-
	Glsi02g2894	627	MobiDBLite	consensus disorder prediction	121	141	-	-
	Glsi02g2894	627	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	12	590	IPR004140	GO:0000145\|GO:0006887
	Glsi02g2894	627	MobiDBLite	consensus disorder prediction	599	619	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g2894	Glsi-ChrGlsi02	77990370	77992408	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g2894	16	594	EXO70 exocyst subunit family	AT3G09520	49.410	0.0	543