Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2886 ATGGGAAAGGGAGGCCAGGACTACGGAAAGCAAGAGAAGATCAGTTCTAAGCCTTCAGACTTTCCGGCGTGGGCTAAGGATGTGCAAGAATGCGAGGAACATTATAAGGTGAAAGTAAAAAGGGGCTTAACTGCCGACGAGGTCGAGGACAAGCGCAAGATCTATGGTTTGAACGAGTTGGAAAAGCACGAGGGCCCGTCGATTTGGCGTCTGATCCTTGACCAGTTCAACGACACATTGGTTCGAATTCTCCTTGCCGCTGCGATCATTTCCTTCGTGCTCGCTTGGTATGATGGCGACGAAGGCGGAGAGCAGGAGATTACAGCTTTCGTGGAGCCTTTGGTGATTTTTTTGATACTGATTGTTAATGCAATAGTGGGAGTGTGGCAAGAGACCAATGCAGAGAAGGCACTTGAAGCGCTTAAAGAGATTCAGTCTGAGCAGGCGTCTGTGATCCGTGATTATAAGAAAATTTTAAATTTGCCCGCGAAGGATCTTGTCCCCGGTGATATTGTCGAACTTAAGGTTGGGGATAAGGTACCTGCCGATATGCGGGTTGTGGAATTGATTAGCTCCACTTTACGATTGGAGCAGGGCTCATTGACTGGGGAGAGTGAAGCAGTGAATAAGACTAACAAGGCTGTTTCTGAGGATGCTGATATTCAGGGTAAGAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAACGGGAGTTGCATTTGCATGGTTACTCAGACGGGCATGGATACGGAGATTGGGAAGGTGCATGAGCAGATACACGTGGCATCACAGAGTGAGGAGGATACACCGTTGAAGAAGAAGCTCAATGAGTTTGGAGAGTTGTTAACTAAGATAATTGGAGTAGTATGTGTTTTGGTATGGCTCATCAATGTTAAGTACTTTCTTAATTGGGAATATGTGGATGGTAGGCCAACGAACTTCAAATTTTCATTTGAGAAGTGCACATATTACTTTGAGATTGCTGTGGCTTTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCTGCAGTCATTACTACTTGCCTAGCGCTGGGTACTCGCAAGATGGCTCAAAAGAATGCCCTTGTTCGAAAGCTACCAAGTGTGGAAACTCTGGGTTGCACGACTGTGATATGTTCAGATAAAACGGGTACGTTAACTACAAACCAGATGGCAGTGGCAAGGCTTGTAGCTATTGGCCCTCATGCAGATACACTGAGATCTTTCAAGGTGGAGGGAACTACATACAATCCATCTGATGGTAAAATAGAAGACTGGCCTAAAGGTCAACTGGATACTAATCTTGAGATGATAGCAAAAATAGCCGCAGTTTGTAACGATGCTGGAGTAGCACAGTTAGAGCACAAGGTTGTGGCCCATGGAATGCCTACTGAAGCAGCCTTGAAGGTCTTGGTAGAGAAGATGGGCCTTCCTGAAGGATCCCATGATGTACGATCAGCAAGTACAAGTACATTACTACGTTGTTGTGAATGGTGGAACGAACATGACCGCCGGATTGCTACTCTTGAATTTGACCGTGATAGGAAGTCAATGGGTGTTATTGTAAACTCCTGTGAAGGGAAAAGGTCACTGCTGGTAAAGGGTGCTGTGGAAAATTTGTTGGAAAGAAGCTCTAAAATTCAGTTGCGTGATGGTTCTGTTGTGAAATTGGATAATAATGCTAAGAACCTTATATTGCAAGCTCTTCATGAAATGTCAACTAGTGCATTACGCTGTTTGGGATTTGCATACAAAGATGAGCTCCCTATGTTTGAAAACTACAGTGGTAGTGACGACGATCCCGCTCATCAGCTTTTGCTCAACCCGTCTAACTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGATTGAGGGATCCTCCTAGGGAGGAGGTACGCCAAGCAATTGAGGACTGCAGAGCAGCTGGAATTCGTGTTATGGTAATTACTGGAGATAATAAGAACACAGCGGAATCTGTATGTCATGAAATTGGTGTGTTTGGACCCAATGAAGACATTAGATCAAAAAGTTTAACAGGTAAAGAATTTATGGAGCTGCACAATAAAAGAACTCATCTGAGACAGAGTGGTGGACTTTTGTTTTCAAGGGCAGAACCTAGACATAAGCAAGAGATTGTGAGGCTGCTCAAAGAGGAAGGGGAGGTAGTTGCCATGACTGGAGATGGTGTGAACGACGCACCTGCCTTGAAGCTTGCTGATATTGGAATTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGATAATTTTAGTACAATTGTCGCAGCAGTCGCTGAAGGCAGATCTATCTACAATAACATGAAGGCTTTTATAAGGTACATGATCTCTTCCAATATTGGTGAGGTTGCCTCGATATTTTTAACTGCAGCATTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACCGATGGACCCCCAGCAACAGCTTTGGGATTTAATCCTCCTGATAAAGGTATAATGAAGAAGCCTCCTCGTCGCAGTGATGACCCACTAATTAATGCATGGATTTTGTTCCGCTATCTGGTTATTGGGATGTATGTTGGAGTAGCGACAGTTGGTGTTTTCATCATATGGTATACTCATGCTTCCTTCTTGGGTATTGACATCAGCGGTGATGGCCATACTCTTGTCACTTACTCCCAACTTGAAAACTGGGGTCACTGCTCCTCTTGGAAGAATTTCACTGCCTCTCCCTTTACAGCCGGTGCGAGAGTCTTCTCTTTTGATAATGACCCCTGTGACTATTTCCAGACTGGAAAAGTAAAAGCTATGACTCTATCCCTCTCTGTGTTGGTAGCCATCGAGATGTTCAACTCCCTCAATGCCCTTTCTGAGGATGGAAGCCTTTTGACAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCTGTGTCATTTGGTCTGCACTTTTTGATCTTGTATGTCCCATTCCTAGCACAAATATTTGGCATTGTGCCCCTGAGCTTCAATGAGTGGCTTCTGGTTTTGGTTGTTGCATTCCCTGTCATTATAGTTGACGAGATTTTGAAGCTTGTGGGGAGGTGTACAAGTGGCACAACAGGTGCGACAATATCAAAGAAAAAAACAGAGTAG 3174 0.4471 MGKGGQDYGKQEKISSKPSDFPAWAKDVQECEEHYKVKVKRGLTADEVEDKRKIYGLNELEKHEGPSIWRLILDQFNDTLVRILLAAAIISFVLAWYDGDEGGEQEITAFVEPLVIFLILIVNAIVGVWQETNAEKALEALKEIQSEQASVIRDYKKILNLPAKDLVPGDIVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKAVSEDADIQGKKCMVFAGTTVVNGSCICMVTQTGMDTEIGKVHEQIHVASQSEEDTPLKKKLNEFGELLTKIIGVVCVLVWLINVKYFLNWEYVDGRPTNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVARLVAIGPHADTLRSFKVEGTTYNPSDGKIEDWPKGQLDTNLEMIAKIAAVCNDAGVAQLEHKVVAHGMPTEAALKVLVEKMGLPEGSHDVRSASTSTLLRCCEWWNEHDRRIATLEFDRDRKSMGVIVNSCEGKRSLLVKGAVENLLERSSKIQLRDGSVVKLDNNAKNLILQALHEMSTSALRCLGFAYKDELPMFENYSGSDDDPAHQLLLNPSNYSSIESELIFVGLVGLRDPPREEVRQAIEDCRAAGIRVMVITGDNKNTAESVCHEIGVFGPNEDIRSKSLTGKEFMELHNKRTHLRQSGGLLFSRAEPRHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVAEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKGIMKKPPRRSDDPLINAWILFRYLVIGMYVGVATVGVFIIWYTHASFLGIDISGDGHTLVTYSQLENWGHCSSWKNFTASPFTAGARVFSFDNDPCDYFQTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLVVAFPVIIVDEILKLVGRCTSGTTGATISKKKTE 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2886 1057 Gene3D - 375 773 IPR023214 -
Glsi02g2886 1057 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 242 395 - -
Glsi02g2886 1057 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 626 IPR023299 GO:0000166
Glsi02g2886 1057 NCBIfam HAD-IC family P-type ATPase 115 228 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g2886 1057 NCBIfam HAD-IC family P-type ATPase 317 399 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g2886 1057 NCBIfam HAD-IC family P-type ATPase 702 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g2886 1057 Pfam haloacid dehalogenase-like hydrolase 375 742 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 752 764 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 728 747 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 644 654 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 622 633 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Glsi02g2886 1057 PRINTS P-type cation-transporting ATPase superfamily signature 197 211 - -
Glsi02g2886 1057 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 1042 IPR023298 -
Glsi02g2886 1057 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Glsi02g2886 1057 Pfam Cation transporter/ATPase, N-terminus 24 91 IPR004014 -
Glsi02g2886 1057 FunFam Calcium-transporting P-type ATPase, putative 624 773 - -
Glsi02g2886 1057 SUPERFAMILY Calcium ATPase, transduction domain A 148 257 IPR008250 -
Glsi02g2886 1057 Gene3D - 388 629 IPR023299 GO:0000166
Glsi02g2886 1057 PANTHER CALCIUM-TRANSPORTING ATPASE 25 1045 - -
Glsi02g2886 1057 Gene3D - 41 262 - -
Glsi02g2886 1057 SFLD p-type atpase 359 780 IPR044492 -
Glsi02g2886 1057 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 388 629 - -
Glsi02g2886 1057 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 792 1046 - -
Glsi02g2886 1057 SFLD Haloacid Dehalogenase 359 780 - -
Glsi02g2886 1057 MobiDBLite consensus disorder prediction 1 21 - -
Glsi02g2886 1057 SUPERFAMILY HAD-like 376 832 IPR036412 -
Glsi02g2886 1057 Pfam Cation transporting ATPase, C-terminus 813 1039 IPR006068 -
Glsi02g2886 1057 Pfam E1-E2 ATPase 144 358 - -
Glsi02g2886 1057 Gene3D - 74 1041 - -
Glsi02g2886 1057 FunFam Calcium-transporting ATPase, putative 123 260 - -
Glsi02g2886 1057 SMART Cation_ATPase_N_a_2 22 96 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2886 Glsi-ChrGlsi02 77926317 77932141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2886 1 1057 Primary Pumps ATPases(2) AT1G07810 78.343 0.0 1712