Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2885 ATGTCTCGCCCATCTCCTCCACCCAAAACTCTGTCGTCTGCGGTACCCTTCGCCGATGACAGGTTCCCCTTCTTCAACCAATCCATGGAGCTCGCCCAACTCCCCCACCAAAGGTCAGCCAGAACCCAAGTCTCACCCTCCCTCGCCGACCTCCTCAAACGCGTCGAAGATGCTCAAAACGACAACTCTCCACCCCACCGTGTTCTCCACCTCCCTCCTCCAACTACTACTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTCTTACCCCTTTGTCCTCTCCTTCAACAACTTAACTTACAGCGTCAGAGTCCCCCGCAAAATGAGCCTCTCTTCATGCTTCACTCGAAACCACGCCTCTTTGAATTCCCCTCTGGACCATCACGACGTGTCTGAATCGAAGATCAACGGCACCAAGATTTTACTCAATGATATTTCCGGCGAGGCGCGAGAAGGCGAAATCATGGCCGTTCTAGGCGCCAGTGGGTCCGGAAAATCGACGCTGATCGACGCCCTCGCCGATCGAATCTCCAAAGAGAGCTTGAAAGGCACCGTCACCTTAAATGGCGAAGCCTTGGAGTCCAGTCTTCTGAAAGTGATTTCAGCTTATGTCATGCAAGACGACCTTCTCTTTCCCATGCTCACTGTGGAAGAGACCCTTATGTTCTCTGCCCAGTTCAGGCTTCCTCGTTCCCTCTCCAAGTCCAGGAAGACAGCTAGAGTCCAAGCTCTCATCGACCAATTGGGTCTCCGGAACGCCGCCAAAACCATCATCGGCGACGAAGGTCATCGGGGCGTTTCCGGTGGAGAACGGCGTCGTGTTTCCATTGGAACCGACATCATCCACGACCCCATTGTCTTGTTCCTCGACGAACCCACTTCTGGACTCGACTCCACCAGCGCCTTCATGGTCGTCAAGGTGTTGCAGCGAATCGCCCAGAGTGGGAGTATTGTCATCATGTCCATACACCAACCCAGTTACAGAATCCTCGGCTTGTTAGACCACTTGATTTTTCTCTCACATGGCCAAACCGTATACAGTGGCTCTCCGGCGAGTCTTCCGCTCTTCTTCTCCGAGTTCGGGCACCCAATACCCGAAAACGAGAACCGGACCGAGTTTGCCCTCGACTTCATTCGCGAACTAGAAGAAACTCCGGGTGGCACCAAGAGCTTAGTGGTATTCAACAAGTCATGGCGATCGAATCACGCGAAAAACAAGCCCAGTGCTAACAACCACCTCGATGGAAGCAAGGTTTCACTCAAGGACGCCATTAGCGCCAGCATTTCCCGAGGTAAATTAGTCTCTGGCGCAACCAACAATTCAAATCTCACAACCTCATCGGTTCCAACATTCGCCAACCCATTTTGGATTGAAATAGCTGTGATAGCGAAACGATCGCTCACCAATTCCAGAAGAATGCCCGAATTGTTTGGTATCAGATTGGGTGCAATTCTGGTCACCGGAGGCATCCTAGCCACCATCTTTTGGCATCTGGATAATTCACCAAAAGGGGCCCAAGAACGCTTGGGTTTCTTCGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCCGAAGCCATCCCCGTCTTCCTTCAAGAGCGATACATATTCATGAGAGAAACTGCTTACAATGCTTACCGTCGTTCGTCCTACGTTCTAGCCCATTCAATCATCTCGATTCCTTCGTTGGTTTTCCTCTCTTTTGCATTCGCCGCCACAACATTCTGGGCAGTGGGTCTCGCCGGTGGCTCATCCGGATTCTTCTTCTACTTCTTCGCCATCGTGGCATCTTTCTGGGCCGGAAACTCCTTCGTGACGTTCCTCTCAGGAATCGTTTCGCACGTGATGTTGGGATTCACAGTAGTCGTCGCCATTTTAGCTTACTTCCTTCTATTCAGTGGGTTCTTCATAAGCAGAGACAGAATCCCAAAGTACTGGTTATGGTTTCACTACCTGTCGCTGGTGAAGTACCCATACGAGGGAGTATTGCAGAATGAGTTCGACATTCATCCTCCGAGGTGCTTCGTGAGAGGGGTCCAGATGTTCGACGAGACGCCGCTAGGAACGGTGCCGGCGTCGTTGAAGGTGGAGTTGCTGAAGAGTATGAGTAATACGTTGGGCGTGAACATCACAAGCTCAACCTGCGTGACCACAGGATTGGATATACTGAAGCAGCAGGGAATTACGGAGCTCAGCAAATGGGATTGCCTGTGGGTTACGATCGCTTGGGGATTTTTCTTTAGATTTCTGTTTTATTTGAGTTTGCTGTATGGAAGTAAGAATAAGAGGACGTAG 2298 0.5161 MSRPSPPPKTLSSAVPFADDRFPFFNQSMELAQLPHQRSARTQVSPSLADLLKRVEDAQNDNSPPHRVLHLPPPTTTPPPPPPPPPPSSYPFVLSFNNLTYSVRVPRKMSLSSCFTRNHASLNSPLDHHDVSESKINGTKILLNDISGEAREGEIMAVLGASGSGKSTLIDALADRISKESLKGTVTLNGEALESSLLKVISAYVMQDDLLFPMLTVEETLMFSAQFRLPRSLSKSRKTARVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDHLIFLSHGQTVYSGSPASLPLFFSEFGHPIPENENRTEFALDFIRELEETPGGTKSLVVFNKSWRSNHAKNKPSANNHLDGSKVSLKDAISASISRGKLVSGATNNSNLTTSSVPTFANPFWIEIAVIAKRSLTNSRRMPELFGIRLGAILVTGGILATIFWHLDNSPKGAQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISIPSLVFLSFAFAATTFWAVGLAGGSSGFFFYFFAIVASFWAGNSFVTFLSGIVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPKYWLWFHYLSLVKYPYEGVLQNEFDIHPPRCFVRGVQMFDETPLGTVPASLKVELLKSMSNTLGVNITSSTCVTTGLDILKQQGITELSKWDCLWVTIAWGFFFRFLFYLSLLYGSKNKRT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2885 765 MobiDBLite consensus disorder prediction 34 89 - -
Glsi02g2885 765 FunFam ABC transporter G family member 6 132 358 - -
Glsi02g2885 765 Pfam ABC transporter 143 295 IPR003439 GO:0005524
Glsi02g2885 765 Gene3D - 127 356 IPR027417 -
Glsi02g2885 765 SMART AAA_5 152 367 IPR003593 GO:0016887
Glsi02g2885 765 Pfam ABC-2 type transporter 460 668 IPR013525 GO:0016020|GO:0140359
Glsi02g2885 765 ProSitePatterns ABC transporters family signature. 267 281 IPR017871 GO:0005524|GO:0016887
Glsi02g2885 765 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 58 753 - -
Glsi02g2885 765 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 126 367 IPR003439 GO:0005524
Glsi02g2885 765 MobiDBLite consensus disorder prediction 67 89 - -
Glsi02g2885 765 Pfam ABC-2 type transporter 324 386 IPR043926 GO:0140359
Glsi02g2885 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2885 Glsi-ChrGlsi02 77921433 77923730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2885 142 327 Calmodulin-binding Proteins AT2G36910 29.101 7.81e-12 67.4